RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CD300LFQ8TDQ1 290 aa13.58□□□□□ -0.24
PHGDH-216ENST00000641375 GPR146Q96CH1 333 aa13.58□□□□□ -0.24
PHGDH-216ENST00000641375 ABHD14AQ9BUJ0 271 aa13.58□□□□□ -0.24
PHGDH-216ENST00000641375 SLC25A32Q9H2D1 315 aa13.58□□□□□ -0.24
PHGDH-216ENST00000641375 GAB2Q9UQC2 676 aa13.58□□□□□ -0.24
PHGDH-216ENST00000641375 RCL1Q9Y2P8 373 aaKnown RBP13.58□□□□□ -0.24
PHGDH-216ENST00000641375 TPT1P13693 172 aaKnown RBP13.57□□□□□ -0.24
PHGDH-216ENST00000641375 RPL30P62888 115 aaKnown RBP13.57□□□□□ -0.24
PHGDH-216ENST00000641375 ID3Q02535 119 aa13.57□□□□□ -0.24
PHGDH-216ENST00000641375 SPAG16Q8N0X2 631 aa13.57□□□□□ -0.24
PHGDH-216ENST00000641375 DMBX1Q8NFW5 382 aa13.57□□□□□ -0.24
PHGDH-216ENST00000641375 SFT2D1Q8WV19 159 aa13.57□□□□□ -0.24
PHGDH-216ENST00000641375 GSN-AS1Q9NRJ2 163 aa13.57□□□□□ -0.24
PHGDH-216ENST00000641375 PITX3O75364 302 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 S100A8P05109 93 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 MMP9P14780 707 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 BTF3P20290 206 aaKnown RBP13.56□□□□□ -0.24
PHGDH-216ENST00000641375 ZNF134P52741 427 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 LYPD2Q6UXB3 125 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 FGFRL1Q8N441 504 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-216ENST00000641375 ZNF714Q96N38 554 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 IFI27L2Q9H2X8 130 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 YLPM1P49750 1951 aaKnown RBP13.56□□□□□ -0.24
PHGDH-216ENST00000641375 A0A0G2JRQ6 117 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 DVL1O14640 695 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 GPR137BO60478 399 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 RAMP3O60896 148 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 IGKV1-5P01602 117 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 EPHA1P21709 976 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 COL8A2P25067 703 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 NFYBP25208 207 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 EIF5AP63241 154 aaKnown RBP13.56□□□□□ -0.24
PHGDH-216ENST00000641375 CXorf66Q5JRM2 361 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-216ENST00000641375 C11orf71Q6IPW1 123 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 CYTL1Q9NRR1 136 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 C19orf12Q9NSK7 152 aa13.56□□□□□ -0.24
PHGDH-216ENST00000641375 RPUSD1Q9UJJ7 312 aaKnown RBP13.56□□□□□ -0.24
PHGDH-216ENST00000641375 LINC00473A8K010 186 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 WRBO00258 174 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 DUTP33316 252 aaKnown RBP13.55□□□□□ -0.24
PHGDH-216ENST00000641375 DTX2Q86UW9 622 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 NEU4Q8WWR8 484 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-216ENST00000641375 H1FXQ92522 213 aaKnown RBP13.55□□□□□ -0.24
PHGDH-216ENST00000641375 CTSZQ9UBR2 303 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 MMP24Q9Y5R2 645 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 C17orf98A8MV24 154 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 RAB29O14966 203 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 TMEM33P57088 247 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 VAMP2P63027 116 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 MRPS11P82912 194 aaKnown RBP13.55□□□□□ -0.24
PHGDH-216ENST00000641375 CT45A1Q5HYN5 189 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 HEPN1Q6WQI6 88 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 BAP18Q8IXM2 172 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 CT45A3Q8NHU0 189 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 NANPQ8TBE9 248 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 NARS2Q96I59 477 aaKnown RBP13.55□□□□□ -0.24
PHGDH-216ENST00000641375 CACNG5Q9UF02 275 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 LRBAP50851 2863 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 CFAP46Q8IYW2 2715 aa13.55□□□□□ -0.24
PHGDH-216ENST00000641375 USP24Q9UPU5 2620 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 SSSCA1O60232 199 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 FCN3O75636 299 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 IGHV3-7P01780 117 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 DANCRP0C864 163 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 DAOP14920 347 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 ZNF816Q0VGE8 651 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-216ENST00000641375 OR2B11Q5JQS5 317 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 TMEM200BQ69YZ2 307 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 OR2C3Q8N628 320 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 ZNF439Q8NDP4 499 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 RAB39BQ96DA2 213 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 C11orf1Q9H5F2 150 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 M0R1X1 148 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 PROP1O75360 226 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 EIF3GO75821 320 aaKnown RBP eCLIP13.54□□□□□ -0.24
PHGDH-216ENST00000641375 S100A9P06702 114 aaKnown RBP13.54□□□□□ -0.24
PHGDH-216ENST00000641375 SOD3P08294 240 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 BRWD1-AS2P59051 145 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 PRAMEF5Q5TYX0 476 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 OR51M1Q9H341 326 aa13.54□□□□□ -0.24
PHGDH-216ENST00000641375 CACNA1BQ00975 2339 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 SLC31A2O15432 143 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 JTBO76095 146 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 S1PR2O95136 353 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 KRASP01116 189 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 IGHV2-70P01814 119 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 GAPDHP04406 335 aaKnown RBP13.53□□□□□ -0.24
PHGDH-216ENST00000641375 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 IGFBP2P18065 325 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 S100PP25815 95 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 KIR2DS2P43631 304 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 UQCC3Q6UW78 93 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 Q6ZRM9 215 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 LEAP2Q969E1 77 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 SLC25A31Q9H0C2 315 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
PHGDH-216ENST00000641375 LYRM2Q9NU23 88 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-216ENST00000641375 FBXL17Q9UF56 701 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms