RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 BTNL3Q6UXE8 466 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 ZNF66Q6ZN08 573 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 TGIF2LYQ8IUE0 185 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 DMRTC2Q8IXT2 367 aaPredicted RBP12.53□□□□□ -0.4
TRIM3-215ENST00000639856 ZCCHC24Q8N2G6 241 aaKnown RBP12.53□□□□□ -0.4
TRIM3-215ENST00000639856 LINC01560Q8TB33 94 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 NEUROG1Q92886 237 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 AGMATQ9BSE5 352 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 HIPK2Q9H2X6 1198 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 SMDT1Q9H4I9 107 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 ODAMA1E959 279 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 S1PR2O95136 353 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 LHBP01229 141 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 ARL16Q0P5N6 197 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 CR1LQ2VPA4 569 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 SP5Q6BEB4 398 aaPredicted RBP12.53□□□□□ -0.4
TRIM3-215ENST00000639856 DPPA3Q6W0C5 159 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 THNSL2Q86YJ6 484 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 ZNF525Q8N782 197 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 EDARADDQ8WWZ3 215 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 PLPPR2Q96GM1 343 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 HSD17B10Q99714 261 aaKnown RBP12.53□□□□□ -0.4
TRIM3-215ENST00000639856 SLC35B3Q9H1N7 401 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 GCM1Q9NP62 436 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 HSPB7Q9UBY9 170 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 PSG11Q9UQ72 335 aa12.53□□□□□ -0.4
TRIM3-215ENST00000639856 DYSFO75923 2080 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 DEFB108AA8MXU0 73 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 SHISA9B4DS77 424 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 H7C2Y5 167 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 ST8SIA5O15466 376 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 GATA4P43694 442 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 CCL20P78556 96 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 SPANXN5Q5MJ07 72 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 FAM122CQ6P4D5 195 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 SSX8Q7RTT4 187 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 HAPLN4Q86UW8 402 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 KIAA1456Q9P272 454 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 LAMP3Q9UQV4 416 aa12.52□□□□□ -0.4
TRIM3-215ENST00000639856 LRRC30A6NM36 301 aa12.52□□□□□ -0.41
TRIM3-215ENST00000639856 CLDN14O95500 239 aa12.52□□□□□ -0.41
TRIM3-215ENST00000639856 CCL8P80075 99 aa12.52□□□□□ -0.41
TRIM3-215ENST00000639856 TLE4Q04727 773 aa12.52□□□□□ -0.41
TRIM3-215ENST00000639856 Q3ZCU0 254 aa12.52□□□□□ -0.41
TRIM3-215ENST00000639856 NCMAPQ5T1S8 102 aa12.52□□□□□ -0.41
TRIM3-215ENST00000639856 SCGB1C1Q8TD33 95 aa12.52□□□□□ -0.41
TRIM3-215ENST00000639856 RBKSQ9H477 322 aa12.52□□□□□ -0.41
TRIM3-215ENST00000639856 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.52□□□□□ -0.41
TRIM3-215ENST00000639856 DCAF16Q9NXF7 216 aa12.52□□□□□ -0.41
TRIM3-215ENST00000639856 IL19Q9UHD0 177 aa12.52□□□□□ -0.41
TRIM3-215ENST00000639856 RAI1Q7Z5J4 1906 aaPredicted RBP12.51□□□□□ -0.41
TRIM3-215ENST00000639856 RBFOX3A6NFN3 312 aa12.51□□□□□ -0.41
TRIM3-215ENST00000639856 LINC00473A8K010 186 aa12.51□□□□□ -0.41
TRIM3-215ENST00000639856 LILRB2Q8N423 598 aa12.51□□□□□ -0.41
TRIM3-215ENST00000639856 ZNRF1Q8ND25 227 aa12.51□□□□□ -0.41
TRIM3-215ENST00000639856 RNASE6Q93091 150 aaKnown RBP12.51□□□□□ -0.41
TRIM3-215ENST00000639856 NGBQ9NPG2 151 aa12.51□□□□□ -0.41
TRIM3-215ENST00000639856 JPT1Q9UK76 154 aa12.51□□□□□ -0.41
TRIM3-215ENST00000639856 SPTBN1Q01082 2364 aaKnown RBP12.51□□□□□ -0.41
TRIM3-215ENST00000639856 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.5□□□□□ -0.41
TRIM3-215ENST00000639856 RAB29O14966 203 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 PPIHO43447 177 aaKnown RBP12.5□□□□□ -0.41
TRIM3-215ENST00000639856 CYB5R3P00387 301 aaPredicted RBP12.5□□□□□ -0.41
TRIM3-215ENST00000639856 OR8U8P0C7N1 319 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 SFTPCP11686 197 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 LTC4SQ16873 150 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 FBXL19-AS1Q494R0 122 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 MORN2Q502X0 79 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 TMEM14EPQ6UXP3 125 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 FAM216AQ8WUB2 273 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 RARRES2Q99969 163 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 PSMG3Q9BT73 122 aaPredicted RBP12.5□□□□□ -0.41
TRIM3-215ENST00000639856 RSG1Q9BU20 258 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 E7EQL1 145 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 YPEL1O60688 119 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 HBE1P02100 147 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 LRRC75BQ2VPJ9 315 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 SFT2D1Q8WV19 159 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 YPEL2Q96QA6 119 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 PARD6GQ9BYG4 376 aaPredicted RBP12.5□□□□□ -0.41
TRIM3-215ENST00000639856 SMCO4Q9NRQ5 59 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 GNG12Q9UBI6 72 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 ABCA4P78363 2273 aa12.5□□□□□ -0.41
TRIM3-215ENST00000639856 DSCAML1Q8TD84 2053 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 C17orf100A8MU93 164 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 PLAUP00749 431 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 SELLP14151 372 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 TNFSF4P23510 183 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 GPR12P47775 334 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 LINC00205P59089 165 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 FLI1Q01543 452 aaPredicted RBP12.49□□□□□ -0.41
TRIM3-215ENST00000639856 TLE1Q04724 770 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 AWAT1Q58HT5 328 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 ETV3LQ6ZN32 361 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 H2BFWTQ7Z2G1 175 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 CD300LFQ8TDQ1 290 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 RBMXL1Q96E39 390 aaKnown RBP12.49□□□□□ -0.41
TRIM3-215ENST00000639856 RNF7Q9UBF6 113 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 ARFGEF3Q5TH69 2177 aa12.49□□□□□ -0.41
TRIM3-215ENST00000639856 F2RL2O00254 374 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms