RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 RFPL3SP0C7P2 107 aa17.25■□□□□ 0.35
PMS1-222ENST00000639501 COX5AP20674 150 aa17.25■□□□□ 0.35
PMS1-222ENST00000639501 G6PCP35575 357 aa17.25■□□□□ 0.35
PMS1-222ENST00000639501 SSR4P51571 173 aa17.25■□□□□ 0.35
PMS1-222ENST00000639501 SPINK9Q5DT21 86 aa17.25■□□□□ 0.35
PMS1-222ENST00000639501 C20orf144Q9BQM9 153 aa17.25■□□□□ 0.35
PMS1-222ENST00000639501 MIEN1Q9BRT3 115 aa17.25■□□□□ 0.35
PMS1-222ENST00000639501 HSPB7Q9UBY9 170 aa17.25■□□□□ 0.35
PMS1-222ENST00000639501 USF3Q68DE3 2245 aa17.25■□□□□ 0.35
PMS1-222ENST00000639501 MED12LQ86YW9 2145 aa17.25■□□□□ 0.35
PMS1-222ENST00000639501 IGHV5-10-1A0A0J9YXX1 117 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 ZG16O60844 167 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 CBR3O75828 277 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 TNFSF13O75888 250 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 HNF1AP20823 631 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 FOXG1P55316 489 aaPredicted RBP17.24■□□□□ 0.35
PMS1-222ENST00000639501 RIPPLY2Q5TAB7 128 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 FAM53AQ6NSI3 398 aaPredicted RBP17.24■□□□□ 0.35
PMS1-222ENST00000639501 OR5A2Q8NGI9 324 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 RNF114Q9Y508 228 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 R4GN57 208 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 TRAV38-1A0A0B4J264 116 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 PIGBOS1A0A0B4J2F0 54 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 F2Z2F3 143 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 KRASP01116 189 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 UMODP07911 640 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 TFPI2P48307 235 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 UBE2NP61088 152 aaKnown RBP17.24■□□□□ 0.35
PMS1-222ENST00000639501 OCIAD1Q9NX40 245 aa17.24■□□□□ 0.35
PMS1-222ENST00000639501 GJE1A6NN92 205 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 NPIPB11E5RHQ5 1161 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 COX6A1P12074 109 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 CBLN1P23435 193 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 IMMP1LQ96LU5 166 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 TMEM204Q9BSN7 226 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 GTF3C1Q12789 2109 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 TMPRSS2O15393 492 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 CDC34P49427 236 aaPredicted RBP17.23■□□□□ 0.35
PMS1-222ENST00000639501 CCL7P80098 99 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 NUFIP2Q7Z417 695 aaKnown RBP17.23■□□□□ 0.35
PMS1-222ENST00000639501 FAM58AQ8N1B3 248 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 Q8N7P7 452 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 SFRP2Q96HF1 295 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 CCDC74BQ96LY2 380 aa17.23■□□□□ 0.35
PMS1-222ENST00000639501 LRP5LA4QPB2 252 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 FAM90A26D6RGX4 464 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 TOX3O15405 576 aaPredicted RBP17.22■□□□□ 0.35
PMS1-222ENST00000639501 DNPH1O43598 174 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 SERF1AO75920 110 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 CD99P14209 185 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 ZNF816Q0VGE8 651 aaPredicted RBP17.22■□□□□ 0.35
PMS1-222ENST00000639501 FOXL1Q12952 345 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 CADM4Q8NFZ8 388 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 C5orf30Q96GV9 206 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 HSPB9Q9BQS6 159 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 OR2J1Q9GZK6 312 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 PATZ1Q9HBE1 687 aaKnown RBP17.22■□□□□ 0.35
PMS1-222ENST00000639501 ODAMA1E959 279 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 IL6RP08887 468 aaPredicted RBP17.22■□□□□ 0.35
PMS1-222ENST00000639501 COMPP49747 757 aaPredicted RBP17.22■□□□□ 0.35
PMS1-222ENST00000639501 LHX2P50458 406 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 ARF1P84077 181 aaKnown RBP17.22■□□□□ 0.35
PMS1-222ENST00000639501 WIPI1Q5MNZ9 446 aaPredicted RBP17.22■□□□□ 0.35
PMS1-222ENST00000639501 DMRTA1Q5VZB9 504 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 VN1R17PQ8TDU5 208 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 ZDHHC11Q9H8X9 412 aa17.22■□□□□ 0.35
PMS1-222ENST00000639501 LOC102723996A0A087X1L8 192 aa17.21■□□□□ 0.35
PMS1-222ENST00000639501 SIRPB1O00241 398 aa17.21■□□□□ 0.35
PMS1-222ENST00000639501 RPL30P62888 115 aaKnown RBP17.21■□□□□ 0.35
PMS1-222ENST00000639501 OR51B6Q9H340 312 aa17.21■□□□□ 0.35
PMS1-222ENST00000639501 FRMD6-AS1P0C7T7 363 aa17.21■□□□□ 0.35
PMS1-222ENST00000639501 CD82P27701 267 aa17.21■□□□□ 0.35
PMS1-222ENST00000639501 THBS3P49746 956 aa17.21■□□□□ 0.35
PMS1-222ENST00000639501 Q6P435 159 aa17.21■□□□□ 0.35
PMS1-222ENST00000639501 OR10P1Q8NGE3 313 aa17.21■□□□□ 0.35
PMS1-222ENST00000639501 LINC00614P0C842 121 aa17.2■□□□□ 0.34
PMS1-222ENST00000639501 P0C879 139 aa17.2■□□□□ 0.34
PMS1-222ENST00000639501 YPEL3P61236 119 aaPredicted RBP17.2■□□□□ 0.34
PMS1-222ENST00000639501 OPN3Q9H1Y3 402 aaPredicted RBP17.2■□□□□ 0.34
PMS1-222ENST00000639501 COL8A2P25067 703 aa17.2■□□□□ 0.34
PMS1-222ENST00000639501 OR5I1Q13606 314 aa17.2■□□□□ 0.34
PMS1-222ENST00000639501 LINC00596Q86U02 117 aa17.2■□□□□ 0.34
PMS1-222ENST00000639501 PCED1AQ9H1Q7 454 aa17.2■□□□□ 0.34
PMS1-222ENST00000639501 TRAPPC2LQ9UL33 140 aa17.2■□□□□ 0.34
PMS1-222ENST00000639501 LRRC30A6NM36 301 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 S1PR2O95136 353 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 PCP4P48539 62 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 TPPP2P59282 170 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 SELENOTP62341 195 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 ATP6V1FQ16864 119 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 MRPL52Q86TS9 123 aaKnown RBP17.19■□□□□ 0.34
PMS1-222ENST00000639501 RPS19BP1Q86WX3 136 aaKnown RBP17.19■□□□□ 0.34
PMS1-222ENST00000639501 ZNF709Q8N972 641 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 DTD1Q8TEA8 209 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 DOCK7Q96N67 2140 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 RYDENQ9NUL5 291 aaKnown RBP17.19■□□□□ 0.34
PMS1-222ENST00000639501 CBY1Q9Y3M2 126 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 PPIAL4AQ9Y536 164 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 PDE6DO43924 150 aa17.19■□□□□ 0.34
PMS1-222ENST00000639501 SRD5A2P31213 254 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms