RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 AP4M1O00189 453 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 SLC25A17O43808 307 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 ZNF708P17019 499 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 NAAAQ02083 359 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 SGK494Q96LW2 274 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 RARRES2Q99969 163 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 AMMECR1Q9Y4X0 333 aaPredicted RBP12.13□□□□□ -0.47
GABRB3-219ENST00000636466 hCG_38984A0A1B0GV85 526 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 NPIPB7O75200 414 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 HPRT1P00492 218 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 TFF1P04155 84 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 EGR1P18146 543 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 ACP1P24666 158 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 LINC00596Q86U02 117 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 RBKSQ9H477 322 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 HEXA-AS1Q9H8Q6 139 aa12.13□□□□□ -0.47
GABRB3-219ENST00000636466 HELTA6NFD8 242 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 SYNGR3O43761 229 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 OR2A4O95047 310 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 NDUFB4O95168 129 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 LY86O95711 162 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 ARF6P62330 175 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 PNRC1Q12796 327 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-219ENST00000636466 ZCCHC24Q8N2G6 241 aaKnown RBP12.12□□□□□ -0.47
GABRB3-219ENST00000636466 DRAM1Q8N682 238 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 PRSS3P2Q8NHM4 247 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 OR2A7Q96R45 310 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 MARCH11A6NNE9 402 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 H3BTX0 84 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 FAM87AP0C7U9 286 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 CECR9P0C854 216 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 CRISP2P16562 243 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 GPR6P46095 362 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-219ENST00000636466 SELENOHQ8IZQ5 122 aaKnown RBP12.12□□□□□ -0.47
GABRB3-219ENST00000636466 MRPL13Q9BYD1 178 aaKnown RBP12.12□□□□□ -0.47
GABRB3-219ENST00000636466 PARD6AQ9NPB6 346 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 TMEM167BQ9NRX6 74 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 PXMP4Q9Y6I8 212 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 IGLV3-12A0A075B6K2 115 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 IGKV1-9A0A0C4DH69 117 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 CTSSP25774 331 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 COL8A1P27658 744 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 IER3P46695 156 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 LGALS7P47929 136 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 GAS1P54826 345 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 LINC01560Q8TB33 94 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 PITX3O75364 302 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 NEURL1O76050 574 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 REG1AP05451 166 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 ZNF137PP52743 207 aa12.12□□□□□ -0.47
GABRB3-219ENST00000636466 PRB3Q04118 309 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-219ENST00000636466 F5H697 171 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 BCL2P10415 239 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 BRS3P32247 399 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 Q6ZT83 130 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 SGMS2Q8NHU3 365 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 MARS2Q96GW9 593 aaKnown RBP12.11□□□□□ -0.47
GABRB3-219ENST00000636466 C10orf113Q5VZT2 155 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 LAMTOR1Q6IAA8 161 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 OR2D3Q8NGH3 330 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 VAMP8Q9BV40 100 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 PKIBQ9C010 78 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 NPVFQ9HCQ7 196 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 MANBALQ9NQG1 85 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 THSD7BQ9C0I4 1608 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 PCNTO95613 3336 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 SRSF10O75494 262 aaKnown RBP12.11□□□□□ -0.47
GABRB3-219ENST00000636466 KRTCAP3Q53RY4 240 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 WDR61Q9GZS3 305 aaKnown RBP12.11□□□□□ -0.47
GABRB3-219ENST00000636466 TUBD1Q9UJT1 453 aa12.11□□□□□ -0.47
GABRB3-219ENST00000636466 PINLYPA6NC86 204 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 GAPDHP04406 335 aaKnown RBP12.1□□□□□ -0.47
GABRB3-219ENST00000636466 TNFSF10P50591 281 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 FAM3BP58499 235 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-219ENST00000636466 PSG7Q13046 419 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 RPEL1Q2QD12 228 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 WDR25Q64LD2 544 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-219ENST00000636466 OR10S1Q8NGN2 331 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 TAF15Q92804 592 aaKnown RBP eCLIP12.1□□□□□ -0.47
GABRB3-219ENST00000636466 RALYQ9UKM9 306 aaKnown RBP12.1□□□□□ -0.47
GABRB3-219ENST00000636466 TMEM187Q14656 261 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 FGFBP3Q8TAT2 258 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 FNDC1Q4ZHG4 1894 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-219ENST00000636466 TCAPO15273 167 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 MELTFP08582 738 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 MEOX2P50222 304 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 RPL39P5Q59GN2 51 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 NHLRC3Q5JS37 347 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 OR5P3Q8WZ94 311 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 AQP10Q96PS8 301 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 TMEM140Q9NV12 185 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 G0S2P27469 103 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 BTCP35070 178 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 RPL27AP46776 148 aaKnown RBP12.1□□□□□ -0.47
GABRB3-219ENST00000636466 FADS6Q8N9I5 356 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 UFC1Q9Y3C8 167 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 PTPRDP23468 1912 aa12.1□□□□□ -0.47
GABRB3-219ENST00000636466 SNURFLB1AK76 121 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms