RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	SCN3B	Q9NY72	215 aa		5.67	□□□□□ -1.5
CACNA1A-222	ENST00000636022	OR1A1	Q9P1Q5	309 aa		5.67	□□□□□ -1.5
CACNA1A-222	ENST00000636022	KIAA1456	Q9P272	454 aa		5.67	□□□□□ -1.5
CACNA1A-222	ENST00000636022	AK6	Q9Y3D8	172 aa	Known RBP	5.67	□□□□□ -1.5
CACNA1A-222	ENST00000636022	NUBP2	Q9Y5Y2	271 aa		5.67	□□□□□ -1.5
CACNA1A-222	ENST00000636022	EPPK1	P58107	5090 aa	Known RBP	5.67	□□□□□ -1.5
CACNA1A-222	ENST00000636022	LDLRAD4	O15165	306 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RGS10	O43665	173 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RBBP9	O75884	186 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	IGKV1-16	P04430	117 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SCT	P09683	121 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	OR8U8	P0C7N1	319 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ZBTB25	P24278	435 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CRHBP	P24387	322 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CEACAM6	P40199	344 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	INSL3	P51460	131 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CLDN12	P56749	244 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	FABP5	Q01469	135 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	MLLT11	Q13015	90 aa	Predicted RBP	5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	PLA2G7	Q13093	441 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	PSG5	Q15238	335 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TRAM1	Q15629	374 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RAB11B	Q15907	218 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CD200R1L	Q6Q8B3	271 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ZNF562	Q6V9R5	426 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SLC38A6	Q8IZM9	456 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ARL6IP6	Q8N6S5	226 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TCTEX1D1	Q8N7M0	179 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ZNF383	Q8NA42	475 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SETD6	Q8TBK2	473 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	OR5B12	Q96R08	314 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RNF5	Q99942	180 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	URM1	Q9BTM9	101 aa	Known RBP	5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TOLLIP	Q9H0E2	274 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ALX4	Q9H161	411 aa	Predicted RBP	5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	PLGRKT	Q9HBL7	147 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	C12orf4	Q9NQ89	552 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	MGAT4A	Q9UM21	535 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	GAB2	Q9UQC2	676 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	FOXA2	Q9Y261	457 aa	Predicted RBP	5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	WASHC3	Q9Y3C0	194 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TPRKB	Q9Y3C4	175 aa		5.66	□□□□□ -1.5
CACNA1A-222	ENST00000636022		A0A1W2PN81	502 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	TRDC	B7Z8K6	153 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ARL6IP5	O75915	188 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	S100A6	P06703	90 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	GSTP1	P09211	210 aa	Known RBP	5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	LGALS1	P09382	135 aa	Known RBP	5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	HSMCR30	P0CW71	290 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	PSMA1	P25786	263 aa	Known RBP	5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CHRNA7	P36544	502 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	MAP2K4	P45985	399 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	VEGFC	P49767	419 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	LINC00205	P59089	165 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SSBP2	P81877	361 aa	Predicted RBP	5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ECSCR	Q19T08	205 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	C2orf76	Q3KRA6	126 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	AKIRIN2	Q53H80	203 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	PRSS48	Q7RTY5	328 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ZNF429	Q86V71	674 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	PPP1R27	Q86WC6	154 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	OR56B1	Q8NGI3	324 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	SVIP	Q8NHG7	77 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	CASTOR1	Q8WTX7	329 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	EDARADD	Q8WWZ3	215 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	DCUN1D4	Q92564	292 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	DLX4	Q92988	240 aa	Predicted RBP	5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	FAM3D	Q96BQ1	224 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	MGLL	Q99685	303 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	PECR	Q9BY49	303 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	ACOT13	Q9NPJ3	140 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RDH8	Q9NYR8	311 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	RNF150	Q9ULK6	438 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	KCNK7	Q9Y2U2	307 aa		5.65	□□□□□ -1.5
CACNA1A-222	ENST00000636022	IGHV4OR15-8	A0A075B7B6	117 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022		A0A087WW49	117 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TMEM272	A0A1B0GTI8	110 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SHISA3	A0PJX4	238 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	LINC01619	G3V211	115 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022		H7C2Y5	167 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	OVOL1	O14753	267 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	HSPA12A	O43301	675 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SPDEF	O95238	335 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CRYZL1	O95825	349 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CA2	P00918	260 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	CBX5	P45973	191 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SLURP1	P55000	103 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	TMEM267	Q0VDI3	215 aa	Predicted RBP	5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	SSX1	Q16384	188 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	MOGAT2	Q3SYC2	334 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ACTBL2	Q562R1	376 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	IGSF11	Q5DX21	431 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	PYHIN1	Q6K0P9	492 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ACSM6	Q6P461	480 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	ZNF600	Q6ZNG1	722 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	PDPN	Q86YL7	162 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	LFNG	Q8NES3	379 aa		5.64	□□□□□ -1.51
CACNA1A-222	ENST00000636022	RHOV	Q96L33	236 aa		5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms