RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SFTPBP07988 381 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 PRKACBP22694 351 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 GLRA1P23415 457 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 DTYMKP23919 212 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 CHATP28329 748 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 FGF12P61328 243 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 OR8B8Q15620 311 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 UQCC3Q6UW78 93 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 Q6ZRM9 215 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 OR2AE1Q8NHA4 323 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 MAFIPQ8WZ33 124 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 DCUN1D4Q92564 292 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 CPNE2Q96FN4 548 aaPredicted RBP3.96□□□□□ -1.77
LINC00550-201ENST00000629293 OR10C1Q96KK4 312 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 C2orf50Q96LR7 162 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 HDHD3Q9BSH5 251 aaPredicted RBP3.96□□□□□ -1.77
LINC00550-201ENST00000629293 RGCCQ9H4X1 137 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 OR5AC2Q9NZP5 309 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 CLN8Q9UBY8 286 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 TIMM10BQ9Y5J6 103 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 IGKV1-12A0A0C4DH73 117 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 C13orf42A0A1B0GVH6 325 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 CRYM-AS1A6NIL9 109 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 F5H697 171 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 M0QZ24 198 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 IGKV1D-12P01611 117 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 IGHV2-70P01814 119 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 TPT1P13693 172 aaKnown RBP3.96□□□□□ -1.78
LINC00550-201ENST00000629293 MDH2P40926 338 aaKnown RBP3.96□□□□□ -1.78
LINC00550-201ENST00000629293 SMUG1Q53HV7 270 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 COLCA1Q6ZS62 124 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 OR52L2PQ8NGH6 319 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 OR4F5Q8NH21 305 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 SLC5A7Q9GZV3 580 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 METTL9Q9H1A3 318 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 ZNF581Q9P0T4 197 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 ATPIF1Q9UII2 106 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 AK3Q9UIJ7 227 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 ANXA10Q9UJ72 324 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 ANGPTL7O43827 346 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 FCGR3AP08637 254 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 MTCP1P56278 107 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 BPIFB3P59826 476 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 FAM3AP98173 230 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 BTN1A1Q13410 526 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 RBM39Q14498 530 aaKnown RBP3.96□□□□□ -1.78
LINC00550-201ENST00000629293 PXDC1Q5TGL8 231 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 ELP2Q6IA86 826 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 ATRAIDQ6UW56 229 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 DHRS11Q6UWP2 260 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 Q6ZPA2 131 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 Q6ZR03 302 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 DPPA2Q7Z7J5 298 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 BAP18Q8IXM2 172 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 SCCPDHQ8NBX0 429 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 BPIFCQ8NFQ6 507 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 OR1S2Q8NGQ3 325 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 SULT4A1Q9BR01 284 aa3.96□□□□□ -1.78
LINC00550-201ENST00000629293 H0YL77 283 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 DNASE2O00115 360 aaPredicted RBP3.95□□□□□ -1.78
LINC00550-201ENST00000629293 FSHBP01225 129 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 IL6RP08887 468 aaPredicted RBP3.95□□□□□ -1.78
LINC00550-201ENST00000629293 IRF2P14316 349 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 GABRR1P24046 479 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 PMELP40967 661 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 SLURP1P55000 103 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 PCBD1P61457 104 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 C10orf91Q5T1B1 145 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 OR8B3Q8NGG8 313 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 MARC2Q969Z3 335 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 OR8B2Q96RD0 313 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 S100A13Q99584 98 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 ZNF2Q9BSG1 426 aaPredicted RBP3.95□□□□□ -1.78
LINC00550-201ENST00000629293 PLEKHJ1Q9NW61 149 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 C14orf166Q9Y224 244 aaKnown RBP3.95□□□□□ -1.78
LINC00550-201ENST00000629293 RNF114Q9Y508 228 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 CBY3A6NI87 242 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 TMEM178BH3BS89 294 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 NRASP01111 189 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 LCATP04180 440 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 PET100P0DJ07 73 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 RBP2P50120 134 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 ARF6P62330 175 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 ZNF92Q03936 586 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 RSU1Q15404 277 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 LYPD2Q6UXB3 125 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 LRTM2Q8N967 370 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.95□□□□□ -1.78
LINC00550-201ENST00000629293 GALNT14Q96FL9 552 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 FAAP24Q9BTP7 215 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 ELL3Q9HB65 397 aaPredicted RBP3.95□□□□□ -1.78
LINC00550-201ENST00000629293 C1orf123Q9NWV4 160 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 TAS2R3Q9NYW6 316 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 FAM96BQ9Y3D0 163 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 FAM230AA0A1W2PPH8 454 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 LRRC30A6NM36 301 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 XRCC2O43543 280 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 TSPAN15O95858 294 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 IGHV4-59P01825 116 aa3.95□□□□□ -1.78
LINC00550-201ENST00000629293 WNT2P09544 360 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms