RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 NRN1Q9NPD7 142 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 SVILO95425 2214 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 TMEM262E9PQX1 116 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 SAMD5Q5TGI4 173 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 GPR146Q96CH1 333 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 ZNF764Q96H86 408 aaPredicted RBP10.06□□□□□ -0.8
CLTC-215ENST00000621829 THAP10Q9P2Z0 257 aaPredicted RBP10.06□□□□□ -0.8
CLTC-215ENST00000621829 RP1L1Q8IWN7 2480 aaPredicted RBP10.06□□□□□ -0.8
CLTC-215ENST00000621829 H3BTX0 84 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 CT62P0C5K7 136 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 VAX1Q5SQQ9 334 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 LAMTOR1Q6IAA8 161 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 OR1L8Q8NGR8 309 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 FANCMQ8IYD8 2048 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 C5orf66Q9H5L9 145 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 PRRG2O14669 202 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 ISXQ2M1V0 245 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 TOX2Q96NM4 488 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 PRRT4C9JH25 899 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 H0Y980 276 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 LOXL3P58215 753 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 ZP1P60852 638 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 VSTM2LQ96N03 204 aa10.06□□□□□ -0.8
CLTC-215ENST00000621829 SCTP09683 121 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 TMEM30AQ9NV96 361 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 PTPRFP10586 1907 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 TRBV20OR9-2A0A075B6H5 130 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 HOXB3P14651 431 aaPredicted RBP10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 TMEM222Q9H0R3 208 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 IL36BQ9NZH7 164 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 KCNMB2Q9Y691 235 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 MCM3APO60318 1980 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 PPIAL4EA0A075B759 164 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 A0A1W2PP11 408 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 PPIAL4FP0DN26 164 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 NOVP48745 357 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 TMEM78Q5T7P6 136 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 GMLQ99445 158 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 PPIAL4AQ9Y536 164 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 DOCK8Q8NF50 2099 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 PNKDQ8N490 385 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 C16orf92Q96LL3 132 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 SCN7AQ01118 1682 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 DDX60LQ5H9U9 1706 aaKnown RBP10.05□□□□□ -0.8
CLTC-215ENST00000621829 SSPNQ14714 243 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 ACSF3Q4G176 576 aaPredicted RBP10.05□□□□□ -0.8
CLTC-215ENST00000621829 GAGE13Q4V321 117 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 SELENOHQ8IZQ5 122 aaKnown RBP10.05□□□□□ -0.8
CLTC-215ENST00000621829 MRGPRX1Q96LB2 322 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 PLAC1Q9HBJ0 212 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 TRAV8-1A0A0A6YYK1 113 aa10.05□□□□□ -0.8
CLTC-215ENST00000621829 MUC21A0A0G2JKD1 596 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 MUC21A0A140T8X8 626 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 C1QCP02747 245 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 PSG1P11464 419 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 CX3CL1P78423 397 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 MUC21Q5SSG8 566 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 ZPLD1Q8TCW7 415 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 PRTN3P24158 256 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 GP6Q9HCN6 339 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 PLCH1Q4KWH8 1693 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 RPS11P62280 158 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLTC-215ENST00000621829 GPR82Q96P67 336 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 NPDC1Q9NQX5 325 aaPredicted RBP10.04□□□□□ -0.8
CLTC-215ENST00000621829 NPIPB6E9PJ23 425 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 LINC00615Q96LM1 132 aaPredicted RBP10.04□□□□□ -0.8
CLTC-215ENST00000621829 GPR132Q9UNW8 380 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 SYT8Q8NBV8 401 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 DNASE2BQ8WZ79 361 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 INSIG2Q9Y5U4 225 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 TRAV5A0A0B4J249 113 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 NXPH1P58417 271 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 HYAL1Q12794 435 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 BHLHA15Q7RTS1 189 aaPredicted RBP10.04□□□□□ -0.8
CLTC-215ENST00000621829 RNASEH2CQ8TDP1 164 aaKnown RBP10.04□□□□□ -0.8
CLTC-215ENST00000621829 PRDM13Q9H4Q3 707 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 MPDU1O75352 247 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 PRDX2P32119 198 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 SRSF5Q13243 272 aaKnown RBP10.04□□□□□ -0.8
CLTC-215ENST00000621829 FADS6Q8N9I5 356 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 HIST1H2BLQ99880 126 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 CHODLQ9H9P2 273 aa10.04□□□□□ -0.8
CLTC-215ENST00000621829 HOXA3O43365 443 aaPredicted RBP10.03□□□□□ -0.8
CLTC-215ENST00000621829 CAPZBP47756 277 aa10.03□□□□□ -0.8
CLTC-215ENST00000621829 PAX2Q02962 417 aa10.03□□□□□ -0.8
CLTC-215ENST00000621829 FAM74A4Q5TZK3 123 aa10.03□□□□□ -0.8
CLTC-215ENST00000621829 ZPBPQ9BS86 351 aa10.03□□□□□ -0.8
CLTC-215ENST00000621829 CRISPLD2Q9H0B8 497 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms