RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MED12LQ86YW9 2145 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 A0A0J9YW62 118 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 KIAA1324LA8MWY0 1029 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-216ENST00000620854 LYZL6O75951 148 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 CRYAAP02489 173 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 CRYABP02511 175 aaKnown RBP5.93□□□□□ -1.46
NEDD9-216ENST00000620854 NUBP1P53384 320 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 SPCS3P61009 180 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 RAC1P63000 192 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 PSG4Q00888 419 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 ID3Q02535 119 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 HERPUD1Q15011 391 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 AARDQ4LEZ3 155 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 FAM78BQ5VT40 261 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 NFAM1Q8NET5 270 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-216ENST00000620854 MRGPRDQ8TDS7 321 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 ABHD3Q8WU67 409 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 SNHG12Q9BXW3 62 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 SLC35D1Q9NTN3 355 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 TAAR3PQ9P1P4 343 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 ARFGEF3Q5TH69 2177 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 ZFP36L1Q07352 338 aaKnown RBP5.93□□□□□ -1.46
NEDD9-216ENST00000620854 VAMP3Q15836 100 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 TEX38Q6PEX7 206 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 C20orf204Q6ZNR8 217 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 OR51G1Q8NGK1 321 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 MS4A10Q96PG2 267 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 OR4C12Q96R67 309 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 OR2D2Q9H210 308 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 ARL2-SNX15V9GYD0 113 aa5.93□□□□□ -1.46
NEDD9-216ENST00000620854 BOD1L1Q8NFC6 3051 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 CACNA1BQ00975 2339 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 A0A1B0GW64 132 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 GRIFINA4D1Z8 144 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 SPRY3O43610 288 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 PGLYRP1O75594 196 aaPredicted RBP5.92□□□□□ -1.46
NEDD9-216ENST00000620854 IL18BPO95998 194 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 MBP02144 154 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 CT45A6P0DMU7 189 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 CT45A5P0DMU8 189 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 CT45A7P0DMV0 189 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 MDH2P40926 338 aaKnown RBP5.92□□□□□ -1.46
NEDD9-216ENST00000620854 TCL1AP56279 114 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 HIST3H3Q16695 136 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 CT45A1Q5HYN5 189 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 TMEM256Q8N2U0 113 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 CT45A3Q8NHU0 189 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 CIB3Q96Q77 187 aaPredicted RBP5.92□□□□□ -1.46
NEDD9-216ENST00000620854 RAB40CQ96S21 281 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 LRFN3Q9BTN0 628 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 NDUFAF3Q9BU61 184 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 CRIM1Q9NZV1 1036 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 NAT8BQ9UHF3 227 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 ZNF391Q9UJN7 358 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 SYNGR2O43760 224 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 GNG10P50151 68 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 H1FOOQ8IZA3 346 aaPredicted RBP5.92□□□□□ -1.46
NEDD9-216ENST00000620854 OR10G4Q8NGN3 311 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 OR10G9Q8NGN4 311 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 OR10G7Q8NGN6 311 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 SRXN1Q9BYN0 137 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 MRPL37Q9BZE1 423 aaKnown RBP5.92□□□□□ -1.46
NEDD9-216ENST00000620854 PARD6AQ9NPB6 346 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 ZNF835Q9Y2P0 537 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 IGKV1-6A0A0C4DH72 117 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 C1QTNF9BB2RNN3 333 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 M0R1B8 84 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 CDIPTO14735 213 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 SCGB2A1O75556 95 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 NUTF2P61970 127 aaKnown RBP5.92□□□□□ -1.46
NEDD9-216ENST00000620854 SUMO1P63165 101 aaKnown RBP5.92□□□□□ -1.46
NEDD9-216ENST00000620854 TNFRSF9Q07011 255 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 IL24Q13007 206 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 ZNF718Q3SXZ3 478 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 NMSQ5H8A3 153 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 C17orf82Q86X59 251 aaPredicted RBP5.92□□□□□ -1.46
NEDD9-216ENST00000620854 RPP25LQ8N5L8 163 aaKnown RBP5.92□□□□□ -1.46
NEDD9-216ENST00000620854 OR2Z1Q8NG97 314 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 PLPPR1Q8TBJ4 325 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 MRPL30Q8TCC3 161 aaKnown RBP5.92□□□□□ -1.46
NEDD9-216ENST00000620854 NGBQ9NPG2 151 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 VAX2Q9UIW0 290 aa5.92□□□□□ -1.46
NEDD9-216ENST00000620854 IGHV1-45A0A0A0MS14 117 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 B4DEV8 164 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 SYNGR1O43759 233 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 PAGE4O60829 102 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 GYPAP02724 150 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 F2RP25116 425 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 FCER1GP30273 86 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 TDRG1Q3Y452 100 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 TCF23Q7RTU1 214 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 LYG1Q8N1E2 194 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 ZIC4Q8N9L1 334 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 SSMEM1Q8WWF3 244 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 VPS25Q9BRG1 176 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 C2orf88Q9BSF0 95 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-216ENST00000620854 OR1A1Q9P1Q5 309 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 ABCA4P78363 2273 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 TMEM30CPA0ZSE6 113 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms