RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TRAPPC2LQ9UL33 140 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 IGKV1-27A0A075B6S5 117 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 IFITM10A6NMD0 228 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF716A6NP11 495 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 M0R143 59 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 COX5AP20674 150 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 BCL3P20749 454 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 ANOS1P23352 680 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 MEF2BQ02080 365 aaPredicted RBP5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 PRDX4Q13162 271 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 MRPL30Q8TCC3 161 aaKnown RBP5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 ABHD5Q8WTS1 349 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 NDUFAF3Q9BU61 184 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 RBKSQ9H477 322 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF71Q9NQZ8 489 aaPredicted RBP5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 PTPRBP23467 1997 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 TRAV1-1A0A0B4J248 108 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 IGKV1-12A0A0C4DH73 117 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A10PA6NDY2 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A18PA6NE21 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A16PA6NEW6 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A20PA6NIJ5 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A8PA6NJQ4 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A7PA6NKC0 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A22PA8MWA6 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A12PA8MX19 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A5PA8MXJ8 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A23PA8MXZ1 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 C17orf112F2Z3M2 114 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 PGLYRP1O75594 196 aaPredicted RBP5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 IGKV1D-12P01611 117 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 GRPP07492 148 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 MMP7P09237 267 aaPredicted RBP5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A15PP0C7V4 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A13PP0C7W8 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A14PP0C7W9 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A24PP0C7X0 464 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 PSG2P11465 335 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 OTX1P32242 354 aaPredicted RBP5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 MC5RP33032 325 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 NPBWR2P48146 333 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 COL10A1Q03692 680 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 BATFQ16520 125 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 TRAT1Q6PIZ9 186 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 APH1AQ96BI3 265 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 GPR146Q96CH1 333 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 TRIB1Q96RU8 372 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 PSMG3Q9BT73 122 aaPredicted RBP5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 OR2H1Q9GZK4 316 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 KCNIP1Q9NZI2 227 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 IGF2RP11717 2491 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 MDFIC2A0A1B0GVS7 189 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 A0A1W2PPV4 95 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 HRASP01112 189 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 PPP1CBP62140 327 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 PSG4Q00888 419 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 OR10V1Q8NGI7 309 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 NABP1Q96AH0 204 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 SARAFQ96BY9 339 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 SRSF8Q9BRL6 282 aaKnown RBP5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 PCGF1Q9BSM1 259 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 PATZ1Q9HBE1 687 aaKnown RBP5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 SPRR3Q9UBC9 169 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 OR2W1Q9Y3N9 320 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 PIEZO2Q9H5I5 2752 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 NCOR2Q9Y618 2525 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 LOC400499M0QZD8 3231 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 DEGS1O15121 323 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 SYNGR3O43761 229 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 IGLV3-1P01715 115 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 RND2P52198 227 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 CYP2G1PQ6ZSU1 146 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 GCNT2Q8N0V5 402 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 CNEP1R1Q8N9A8 125 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 OR10P1Q8NGE3 313 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 C2orf88Q9BSF0 95 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 FKBP11Q9NYL4 201 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 DUSP13Q9UII6 198 aa5.93□□□□□ -1.46
SRGAP3-213ENST00000618999 AKAP13Q12802 2813 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 C5orf49A4QMS7 147 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 KBTBD11O94819 623 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 AMBPP02760 352 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 CHRNA7P36544 502 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 FGF12P61328 243 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 PAX5Q02548 391 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 NMSQ5H8A3 153 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM90A2PQ658T7 463 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 ABLIM2Q6H8Q1 611 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 TGIF2LYQ8IUE0 185 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 OR10G9Q8NGN4 311 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 OR10G7Q8NGN6 311 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 MISP3Q96FF7 219 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 NEIL1Q96FI4 390 aaPredicted RBP5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 WDYHV1Q96HA8 205 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 SAMD10Q9BYL1 202 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 ZDHHC11Q9H8X9 412 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 MANBALQ9NQG1 85 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 TP53TG5Q9Y2B4 290 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 TRAPPC1Q9Y5R8 145 aa5.92□□□□□ -1.46
SRGAP3-213ENST00000618999 DOCK7Q96N67 2140 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms