RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 HOGA1Q86XE5 327 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 SPCS1Q9Y6A9 102 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 TMEM250H0YL14 139 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 TMEM50AO95807 157 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 CCL4P13236 92 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 LCN2P80188 198 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 CD300LDQ6UXZ3 194 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 VN1R4Q7Z5H5 301 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 ATG4DQ86TL0 474 aaPredicted RBP5.19□□□□□ -1.58
RFX3-212ENST00000617270 TMEM222Q9H0R3 208 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 AGAP20933 346 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 INO80CQ6PI98 192 aaPredicted RBP5.19□□□□□ -1.58
RFX3-212ENST00000617270 C1orf210Q8IVY1 113 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 PIMREGQ9BSJ6 248 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 NXT2Q9NPJ8 142 aaKnown RBP5.19□□□□□ -1.58
RFX3-212ENST00000617270 ARFGEF2Q9Y6D5 1785 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 MYO7AQ13402 2215 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 HRKO00198 91 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 CTDSPLO15194 276 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 ATXN7O15265 892 aaPredicted RBP5.19□□□□□ -1.58
RFX3-212ENST00000617270 SLC25A20O43772 301 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 IGHV3-23P01764 117 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 SAMD13Q5VXD3 122 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 VKORC1L1Q8N0U8 176 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 LEAP2Q969E1 77 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 NRTNQ99748 197 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 ANAPC13Q9BS18 74 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 SPAARA0A1B0GVQ0 90 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 H0Y980 276 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 ZFP36L2P47974 494 aaKnown RBP5.19□□□□□ -1.58
RFX3-212ENST00000617270 CLPPQ16740 277 aaPredicted RBP5.19□□□□□ -1.58
RFX3-212ENST00000617270 TTC9CQ8N5M4 171 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 OR51M1Q9H341 326 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 NDUFA3O95167 84 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 CBLN1P23435 193 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 ZNF826PQ6ZT77 177 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 C10orf111Q8N326 155 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 C14orf144Q96I85 54 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 PIK3C2AO00443 1686 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 PAX2Q02962 417 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 UNC119Q13432 240 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 ZNF645Q8N7E2 425 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 DUX3Q96PT4 197 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 GPHA2Q96T91 129 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 TTTY12Q9BZ98 90 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 RP1P56715 2156 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 LOC390937A0A1W2PQ73 354 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 OR2H2O95918 312 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 IGLV3-25P01717 112 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 PEAR1Q5VY43 1037 aaPredicted RBP5.19□□□□□ -1.58
RFX3-212ENST00000617270 ZPLD1Q8TCW7 415 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 GPBAR1Q8TDU6 330 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 SCGB3A1Q96QR1 104 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 NALCNQ8IZF0 1738 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 A0A1W2PP11 408 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 H7C1H1 209 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 SYNGR3O43761 229 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 CFDP00746 253 aaPredicted RBP5.18□□□□□ -1.58
RFX3-212ENST00000617270 DCAF10Q5QP82 559 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 TMEM174Q8WUU8 243 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 CLDN16Q9Y5I7 305 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 S4R3C0 116 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 MGST3O14880 152 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 LINC00614P0C842 121 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 FGF5P12034 268 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 PUSL1Q8N0Z8 303 aaKnown RBP5.18□□□□□ -1.58
RFX3-212ENST00000617270 ITLN1Q8WWA0 313 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 PMCHL2Q9BQD1 86 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 ZNF107Q9UII5 783 aaPredicted RBP5.18□□□□□ -1.58
RFX3-212ENST00000617270 A0A0U1RQV5 110 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 A0A1W2PQM1 296 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 NKX2-8O15522 239 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 OGG1O15527 345 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 NPPCP23582 126 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 NUTF2P61970 127 aaKnown RBP5.18□□□□□ -1.58
RFX3-212ENST00000617270 DMRTA1Q5VZB9 504 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 MARS2Q96GW9 593 aaKnown RBP5.18□□□□□ -1.58
RFX3-212ENST00000617270 SH3BGRL3Q9H299 93 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 MRPS18BQ9Y676 258 aaKnown RBP5.18□□□□□ -1.58
RFX3-212ENST00000617270 LINC00862A6NCI5 91 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 MARCH11A6NNE9 402 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 NPIPB4C9JG80 1138 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 MC5RP33032 325 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 ASIPP42127 132 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 ATP5J2P56134 94 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 CENPVQ7Z7K6 275 aaPredicted RBP5.18□□□□□ -1.58
RFX3-212ENST00000617270 PLA2G2FQ9BZM2 168 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 MIXL1Q9H2W2 232 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 DNAJC4Q9NNZ3 241 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 FAM60AQ9NP50 221 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 SNRNP200O75643 2136 aaKnown RBP5.18□□□□□ -1.58
RFX3-212ENST00000617270 F5P12259 2224 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 LIFP15018 202 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 CXorf66Q5JRM2 361 aaPredicted RBP5.18□□□□□ -1.58
RFX3-212ENST00000617270 TMEM92Q6UXU6 159 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 TRGV2A0A075B6R0 118 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 SHISA5Q8N114 240 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 TXNDC17Q9BRA2 123 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 NUP205Q92621 2012 aa5.18□□□□□ -1.58
RFX3-212ENST00000617270 KCNE1BA0A087WTH5 132 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms