RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 IGKV1-39P01597 117 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 IGKV1D-39P04432 117 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 IL6RP08887 468 aaPredicted RBP5.65□□□□□ -1.5
LMO3-235ENST00000616247 PDLIM4P50479 330 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 LINC00205P59089 165 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 Q56UQ5 140 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 TPTE2P1Q5T6R2 138 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 VHLLQ6RSH7 139 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 H2BFWTQ7Z2G1 175 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 KMT5CQ86Y97 462 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 ZNF295-AS1Q8N0V1 137 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 OR1L1Q8NH94 360 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 RFESDQ8TAC1 157 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 OCC1Q8TAD7 63 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 ZNF596Q8TC21 504 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 APOBEC3DQ96AK3 386 aaPredicted RBP5.65□□□□□ -1.5
LMO3-235ENST00000616247 ALKBH7Q9BT30 221 aaPredicted RBP5.65□□□□□ -1.5
LMO3-235ENST00000616247 PRRG4Q9BZD6 226 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 LIN7CQ9NUP9 197 aaKnown RBP5.65□□□□□ -1.5
LMO3-235ENST00000616247 ELOVL5Q9NYP7 299 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 MTCH1Q9NZJ7 389 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 FBXL7Q9UJT9 491 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 CELSR3Q9NYQ7 3312 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 FREM1Q5H8C1 2179 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 ABCA1O95477 2261 aa5.65□□□□□ -1.5
LMO3-235ENST00000616247 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 DEFB108AA8MXU0 73 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 SYNGR3O43761 229 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 VAMP5O95183 116 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 RAC2P15153 192 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 CFHR1Q03591 330 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 GAGE1Q13065 139 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 ATP6V1FQ16864 119 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 FAM53AQ6NSI3 398 aaPredicted RBP5.65□□□□□ -1.51
LMO3-235ENST00000616247 RHBDD2Q6NTF9 364 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 C20orf144Q9BQM9 153 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 SRXN1Q9BYN0 137 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 OR2H1Q9GZK4 316 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 WNT5BQ9H1J7 359 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 NRN1Q9NPD7 142 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 HEYLQ9NQ87 328 aaPredicted RBP5.65□□□□□ -1.51
LMO3-235ENST00000616247 DEPPQ9NTK1 212 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 TMEM38BQ9NVV0 291 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 BET1LQ9NYM9 111 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 CRIM1Q9NZV1 1036 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 CLCF1Q9UBD9 225 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 UQCR10Q9UDW1 63 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 MMP17Q9ULZ9 603 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 IGHV3-43A0A0B4J1X8 118 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 hCG_38984A0A1B0GV85 526 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 LNP1A1A4G5 178 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 ZIC3O60481 467 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 RAMP3O60896 148 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 NGFP01138 241 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 IGHV3-43DP0DP04 118 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 COL8A2P25067 703 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 OTX1P32242 354 aaPredicted RBP5.65□□□□□ -1.51
LMO3-235ENST00000616247 FGF12P61328 243 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 HIST3H3Q16695 136 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 MAJINQ3KP22 176 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 KRTCAP3Q53RY4 240 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 SAPCD1Q5SSQ6 148 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 ASPHD1Q5U4P2 390 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 ZNF738Q8NE65 137 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 OR4B1Q8NGF8 309 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 OR5A2Q8NGI9 324 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 ABHD3Q8WU67 409 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 NINJ1Q92982 152 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 AGMATQ9BSE5 352 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 OR2D2Q9H210 308 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 RARRES3Q9UL19 164 aa5.65□□□□□ -1.51
LMO3-235ENST00000616247 M0QZ24 198 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 VENTXO95231 258 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 IGLV3-1P01715 115 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 ARL14EPLP0DKL9 152 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 RPL15P61313 204 aaKnown RBP5.64□□□□□ -1.51
LMO3-235ENST00000616247 QTRT1Q9BXR0 403 aaKnown RBP5.64□□□□□ -1.51
LMO3-235ENST00000616247 NPCDR1Q9BY65 106 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 C19orf25Q9UFG5 118 aaPredicted RBP5.64□□□□□ -1.51
LMO3-235ENST00000616247 THADAQ6YHU6 1953 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 ANKRD30BLA7E2S9 258 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 LMO7DNF2Z398 122 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 HSBP1O75506 76 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 GRPP07492 148 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 CRYGSP22914 178 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 SRIP30626 198 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 PTGDSP41222 190 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 PCBD1P61457 104 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 RPL19P84098 196 aaKnown RBP5.64□□□□□ -1.51
LMO3-235ENST00000616247 WIPI1Q5MNZ9 446 aaPredicted RBP5.64□□□□□ -1.51
LMO3-235ENST00000616247 C10orf128Q5T292 105 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 MIC13Q5XKP0 118 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 DOLPP1Q86YN1 238 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 DRAM1Q8N682 238 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 ZIC4Q8N9L1 334 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 NFAM1Q8NET5 270 aaPredicted RBP5.64□□□□□ -1.51
LMO3-235ENST00000616247 RNF2Q99496 336 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 LRFN3Q9BTN0 628 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 TWSG1Q9GZX9 223 aa5.64□□□□□ -1.51
LMO3-235ENST00000616247 ZNF703Q9H7S9 590 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms