RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 CMTM1Q8IZ96 169 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 RPUSD4Q96CM3 377 aaKnown RBP11.08□□□□□ -0.64
FOXN3-219ENST00000615335 C10orf35Q96D05 121 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 SLC2A9Q9NRM0 540 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 OR6C3Q9NZP0 311 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 ST3GAL6Q9Y274 331 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 PAM16Q9Y3D7 125 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 NCOA6Q14686 2063 aaPredicted RBP11.08□□□□□ -0.64
FOXN3-219ENST00000615335 IGKV1D-8A0A087WSZ0 117 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 IGHV2OR16-5A0A0B4J2B6 119 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 RNF212BA8MTL3 300 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 M0R135 149 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 NBEAP1P0C6P0 100 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 TUBG1P23258 451 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 GALR1P47211 349 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 UCP3P55916 312 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 MMDQ15546 238 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 PRSS8Q16651 343 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 CFAP161Q6P656 301 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 Q6ZSR3 168 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 STARD4Q96DR4 205 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 ZNF799Q96GE5 643 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 TMEM38BQ9NVV0 291 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 PLEK2Q9NYT0 353 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 UQCR10Q9UDW1 63 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 PROCRQ9UNN8 238 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 LAMTOR2Q9Y2Q5 125 aa11.08□□□□□ -0.64
FOXN3-219ENST00000615335 HRASP01112 189 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 DBHP09172 617 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 OTX1P32242 354 aaPredicted RBP11.07□□□□□ -0.64
FOXN3-219ENST00000615335 FOXG1P55316 489 aaPredicted RBP11.07□□□□□ -0.64
FOXN3-219ENST00000615335 TPPP2P59282 170 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 MRPS34P82930 218 aaKnown RBP11.07□□□□□ -0.64
FOXN3-219ENST00000615335 ZNF92Q03936 586 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 TOMM40LQ969M1 308 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 SPTSSAQ969W0 71 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 PLSCR4Q9NRQ2 329 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 NAT8Q9UHE5 227 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 WIPI2Q9Y4P8 454 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 RBM7Q9Y580 266 aaKnown RBP11.07□□□□□ -0.64
FOXN3-219ENST00000615335 CFAP46Q8IYW2 2715 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 ZNF732B4DXR9 585 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 K7ERU9 68 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 PITX3O75364 302 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 CTSDP07339 412 aaPredicted RBP11.07□□□□□ -0.64
FOXN3-219ENST00000615335 MTCP1P56278 107 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 ARF1P84077 181 aaKnown RBP11.07□□□□□ -0.64
FOXN3-219ENST00000615335 C16orf82Q7Z2V1 217 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 Q96M66 194 aa11.07□□□□□ -0.64
FOXN3-219ENST00000615335 HDHD3Q9BSH5 251 aaPredicted RBP11.07□□□□□ -0.64
FOXN3-219ENST00000615335 RCL1Q9Y2P8 373 aaKnown RBP11.07□□□□□ -0.64
FOXN3-219ENST00000615335 H7BYZ3 331 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 FGF8P55075 233 aaPredicted RBP11.06□□□□□ -0.64
FOXN3-219ENST00000615335 MRPL49Q13405 166 aaKnown RBP11.06□□□□□ -0.64
FOXN3-219ENST00000615335 FAM27BQ5VT28 67 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 MRPL24Q96A35 216 aaKnown RBP11.06□□□□□ -0.64
FOXN3-219ENST00000615335 VKORC1Q9BQB6 163 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 AGMATQ9BSE5 352 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 SFXN3Q9BWM7 321 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 A0A096LPE4 126 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 A0A0G2JNJ9 132 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 A0A1W2PPZ6 126 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 CRYM-AS1A6NIL9 109 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 BCL2P10415 239 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 SRP14P37108 136 aaKnown RBP11.06□□□□□ -0.64
FOXN3-219ENST00000615335 ERVS71-1P61550 626 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 MPV17LQ2QL34 196 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 SNAI3Q3KNW1 292 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 WDR25Q64LD2 544 aaPredicted RBP11.06□□□□□ -0.64
FOXN3-219ENST00000615335 Q6ZT83 130 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 MYPOPQ86VE0 399 aaPredicted RBP11.06□□□□□ -0.64
FOXN3-219ENST00000615335 CST9LQ9H4G1 147 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 ZNF430Q9H8G1 570 aaPredicted RBP11.06□□□□□ -0.64
FOXN3-219ENST00000615335 Q9UFV3 132 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 ANXA10Q9UJ72 324 aa11.06□□□□□ -0.64
FOXN3-219ENST00000615335 ESPL1Q14674 2120 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 ST8SIA3O43173 380 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 CGAP01215 116 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 GZMHP20718 246 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 TNFSF4P23510 183 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 CA7P43166 264 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 LCN2P80188 198 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 EWSR1Q01844 656 aaKnown RBP eCLIP11.05□□□□□ -0.64
FOXN3-219ENST00000615335 TMEM41BQ5BJD5 291 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 FBXL14Q8N1E6 418 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 OR2T10Q8NGZ9 312 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 IL22RA2Q969J5 263 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 ABHD14AQ9BUJ0 271 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 BET1LQ9NYM9 111 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 IL19Q9UHD0 177 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 M0QZ24 198 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 CNOT4O95628 575 aaKnown RBP11.05□□□□□ -0.64
FOXN3-219ENST00000615335 CTXN2P0C2S0 81 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 S100A7P31151 101 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 OPRM1P35372 400 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 GNMTQ14749 295 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 TMEM211Q6ICI0 200 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 CMTM2Q8TAZ6 248 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 RND1Q92730 232 aa11.05□□□□□ -0.64
FOXN3-219ENST00000615335 SPSB1Q96BD6 273 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms