RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 IGLC1P0CG04 106 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 COX5AP20674 150 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 UBE2NP61088 152 aaKnown RBP7.48□□□□□ -1.21
VPS11-206ENST00000614944 MEP1BQ16820 701 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 FAM214BQ7L5A3 538 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 TCTEX1D1Q8N7M0 179 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 OR52E5Q8NH55 327 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 FNDC9Q8TBE3 224 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 ELOVL3Q9HB03 270 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 FREM3P0C091 2139 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 TAX1BP3O14907 124 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 AKAIN1P0CW23 69 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 CRYGSP22914 178 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 GNB2P62879 340 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 WDR25Q64LD2 544 aaPredicted RBP7.48□□□□□ -1.21
VPS11-206ENST00000614944 ANKRD16Q6P6B7 361 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 DOLPP1Q86YN1 238 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 SLC22A24Q8N4F4 322 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 ZNF775Q96BV0 537 aaPredicted RBP7.48□□□□□ -1.21
VPS11-206ENST00000614944 PRRG4Q9BZD6 226 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 ZNF581Q9P0T4 197 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 EMC9Q9Y3B6 208 aa7.48□□□□□ -1.21
VPS11-206ENST00000614944 AK6Q9Y3D8 172 aaKnown RBP7.48□□□□□ -1.21
VPS11-206ENST00000614944 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.47□□□□□ -1.21
VPS11-206ENST00000614944 IGSF23A1L1A6 192 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 HLA-AP01891 365 aaKnown RBP7.47□□□□□ -1.21
VPS11-206ENST00000614944 PET100P0DJ07 73 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 EDNRAP25101 427 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 CTRLP40313 264 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 KLRB1Q12918 225 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 OR5B3Q8NH48 314 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 GALMQ96C23 342 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 AQP10Q96PS8 301 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 AMELYQ99218 206 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 RNF126Q9BV68 326 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 EP300Q09472 2414 aaPredicted RBP7.47□□□□□ -1.21
VPS11-206ENST00000614944 A0A1B0GTH9 108 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 K7EM74 188 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 MSTNO14793 375 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 SYNGR3O43761 229 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 CGAP01215 116 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 PTHLHP12272 177 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 CD99P14209 185 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 MMP9P14780 707 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 CNN1P51911 297 aaKnown RBP7.47□□□□□ -1.21
VPS11-206ENST00000614944 NANOS3P60323 173 aaKnown RBP7.47□□□□□ -1.21
VPS11-206ENST00000614944 CYCSP99999 105 aaKnown RBP7.47□□□□□ -1.21
VPS11-206ENST00000614944 CD300EQ496F6 205 aaPredicted RBP7.47□□□□□ -1.21
VPS11-206ENST00000614944 Q499Y3 187 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 GCSAMLQ5JQS6 135 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 NEGR1Q7Z3B1 354 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 OR51A2Q8NGJ7 313 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 DNAJA3Q96EY1 480 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 OR10C1Q96KK4 312 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 SFXN3Q9BWM7 321 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 PLA2G2EQ9NZK7 142 aa7.47□□□□□ -1.21
VPS11-206ENST00000614944 FAM230AA0A1W2PPH8 454 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 GAGE12HA6NDE8 117 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 GAGE10A6NGK3 116 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 MSGN1A6NI15 193 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 H0Y980 276 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 SLC17A3O00476 420 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 DBHP09172 617 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 H2BFMP0C1H6 154 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 C1QTNF9P0C862 333 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 CD33P20138 364 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 HLA-DRB3P79483 266 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 PSG9Q00887 426 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 TSPO2Q5TGU0 170 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 ZNF880Q6PDB4 577 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 ARL9Q6T311 187 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 TGIF2LYQ8IUE0 185 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 BLNKQ8WV28 456 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 NINJ1Q92982 152 aa7.46□□□□□ -1.21
VPS11-206ENST00000614944 REPIN1Q9BWE0 567 aaKnown RBP7.46□□□□□ -1.21
VPS11-206ENST00000614944 MRPL16Q9NX20 251 aaKnown RBP7.46□□□□□ -1.21
VPS11-206ENST00000614944 IGHV2-26A0A0B4J1V2 119 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 IFITM5A6NNB3 132 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 J3QR06 171 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 TPPP2P59282 170 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 ZNF92Q03936 586 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 SRYQ05066 204 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 ZNF585BQ52M93 769 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 Q6ZT83 130 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 LSRQ86X29 649 aaPredicted RBP7.46□□□□□ -1.22
VPS11-206ENST00000614944 STARD4Q96DR4 205 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 DERL3Q96Q80 235 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 C13orf42A0A1B0GVH6 325 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 MAP1LC3B2A6NCE7 125 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 JTBO76095 146 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 PRH1P02810 166 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 AMTP48728 403 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 FAM3BP58499 235 aaPredicted RBP7.46□□□□□ -1.22
VPS11-206ENST00000614944 CEACAM16Q2WEN9 425 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 ACSM3Q53FZ2 586 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 WDR38Q5JTN6 314 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 Q6ZWC4 215 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 C1orf174Q8IYL3 243 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 SPTSSAQ969W0 71 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 RARRES2Q99969 163 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms