RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 GTF3C1Q12789 2109 aa10.02□□□□□ -0.8
CDH5-208ENST00000614547 RNF212BA8MTL3 300 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 LIFP15018 202 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 NXPH1P58417 271 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 ZNF573Q86YE8 665 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 OR52L2PQ8NGH6 319 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 SIGLEC12Q96PQ1 595 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.02□□□□□ -0.81
CDH5-208ENST00000614547 MGAQ8IWI9 3026 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 IGF2RP11717 2491 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 PKDREJQ9NTG1 2253 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 SPTBN1Q01082 2364 aaKnown RBP10.02□□□□□ -0.81
CDH5-208ENST00000614547 RAC3P60763 192 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 OR8B8Q15620 311 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 NMSQ5H8A3 153 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 FAM53AQ6NSI3 398 aaPredicted RBP10.02□□□□□ -0.81
CDH5-208ENST00000614547 TUSC5Q8IXB3 177 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 OR8I2Q8N0Y5 310 aa10.02□□□□□ -0.81
CDH5-208ENST00000614547 A0A0G2JMM0 328 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 A0A1W2PPB8 328 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 A0A1W2PRS3 328 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 KIR3DP1A8MWS1 328 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 SYNGR3O43761 229 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 CD82P27701 267 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 PAX9P55771 341 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 UBE2NP61088 152 aaKnown RBP10.01□□□□□ -0.81
CDH5-208ENST00000614547 FGF12P61328 243 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 LRRC75BQ2VPJ9 315 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 VKORC1L1Q8N0U8 176 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 TMEM170AQ8WVE7 144 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 NABP1Q96AH0 204 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 C10orf35Q96D05 121 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 hCG_38984A0A1B0GV85 526 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 SERF1AO75920 110 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 OTX1P32242 354 aaPredicted RBP10.01□□□□□ -0.81
CDH5-208ENST00000614547 FOXG1P55316 489 aaPredicted RBP10.01□□□□□ -0.81
CDH5-208ENST00000614547 GNG3P63215 75 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 AESQ08117 197 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 ALKBH6Q3KRA9 238 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 MIC13Q5XKP0 118 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 SPINK14Q6IE38 97 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 FAM19A2Q8N3H0 131 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 CISD2Q8N5K1 135 aaKnown RBP10.01□□□□□ -0.81
CDH5-208ENST00000614547 NFAM1Q8NET5 270 aaPredicted RBP10.01□□□□□ -0.81
CDH5-208ENST00000614547 OR1L1Q8NH94 360 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 APH1AQ96BI3 265 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 P2RX4Q99571 388 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 MRPL18Q9H0U6 180 aaKnown RBP10.01□□□□□ -0.81
CDH5-208ENST00000614547 DCHS1Q96JQ0 3298 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 RFPL3SP0C7P2 107 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 ADMP35318 185 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 CAMPP49913 170 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 RPP30P78346 268 aaKnown RBP10.01□□□□□ -0.81
CDH5-208ENST00000614547 MMDQ15546 238 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 C20orf204Q6ZNR8 217 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 NHLRC2Q8NBF2 726 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 CPEB3Q8NE35 698 aaKnown RBP10.01□□□□□ -0.81
CDH5-208ENST00000614547 DLL3Q9NYJ7 618 aa10.01□□□□□ -0.81
CDH5-208ENST00000614547 TCTAP57738 103 aa10□□□□□ -0.81
CDH5-208ENST00000614547 TDRG1Q3Y452 100 aa10□□□□□ -0.81
CDH5-208ENST00000614547 OR4C5Q8NGB2 326 aa10□□□□□ -0.81
CDH5-208ENST00000614547 GALMQ96C23 342 aa10□□□□□ -0.81
CDH5-208ENST00000614547 DIRC2Q96SL1 478 aa10□□□□□ -0.81
CDH5-208ENST00000614547 ATRXP46100 2492 aa10□□□□□ -0.81
CDH5-208ENST00000614547 S1PR2O95136 353 aa10□□□□□ -0.81
CDH5-208ENST00000614547 IGKV1D-33P01593 117 aa10□□□□□ -0.81
CDH5-208ENST00000614547 IGKV1-33P01594 117 aa10□□□□□ -0.81
CDH5-208ENST00000614547 RAB4AP20338 218 aa10□□□□□ -0.81
CDH5-208ENST00000614547 CHRNB4P30926 498 aa10□□□□□ -0.81
CDH5-208ENST00000614547 HOXC12P31275 282 aa10□□□□□ -0.81
CDH5-208ENST00000614547 RAB7AP51149 207 aa10□□□□□ -0.81
CDH5-208ENST00000614547 HOXA4Q00056 320 aaPredicted RBP10□□□□□ -0.81
CDH5-208ENST00000614547 OR8G5Q8NG78 346 aa10□□□□□ -0.81
CDH5-208ENST00000614547 APOBEC3DQ96AK3 386 aaPredicted RBP10□□□□□ -0.81
CDH5-208ENST00000614547 HIPK2Q9H2X6 1198 aa10□□□□□ -0.81
CDH5-208ENST00000614547 POLR3KQ9Y2Y1 108 aaPredicted RBP10□□□□□ -0.81
CDH5-208ENST00000614547 ARL2-SNX15V9GYD0 113 aa10□□□□□ -0.81
CDH5-208ENST00000614547 WNK2Q9Y3S1 2297 aa10□□□□□ -0.81
CDH5-208ENST00000614547 PIGBOS1A0A0B4J2F0 54 aa10□□□□□ -0.81
CDH5-208ENST00000614547 A0A1B0GW64 132 aa10□□□□□ -0.81
CDH5-208ENST00000614547 RAMP3O60896 148 aa10□□□□□ -0.81
CDH5-208ENST00000614547 HSBP1O75506 76 aa10□□□□□ -0.81
CDH5-208ENST00000614547 FABP6P51161 128 aa10□□□□□ -0.81
CDH5-208ENST00000614547 HLA-DRB5Q30154 266 aa10□□□□□ -0.81
CDH5-208ENST00000614547 SPATA45Q537H7 98 aa10□□□□□ -0.81
CDH5-208ENST00000614547 Q56UQ5 140 aa10□□□□□ -0.81
CDH5-208ENST00000614547 LYSMD4Q5XG99 296 aa10□□□□□ -0.81
CDH5-208ENST00000614547 ZNF826PQ6ZT77 177 aa10□□□□□ -0.81
CDH5-208ENST00000614547 DRAM1Q8N682 238 aa10□□□□□ -0.81
CDH5-208ENST00000614547 CNEP1R1Q8N9A8 125 aa10□□□□□ -0.81
CDH5-208ENST00000614547 OR4P4Q8NGL7 312 aa10□□□□□ -0.81
CDH5-208ENST00000614547 SLC35D1Q9NTN3 355 aa10□□□□□ -0.81
CDH5-208ENST00000614547 DCAF16Q9NXF7 216 aa10□□□□□ -0.81
CDH5-208ENST00000614547 CHCHD2Q9Y6H1 151 aaPredicted RBP10□□□□□ -0.81
CDH5-208ENST00000614547 IGKV1-6A0A0C4DH72 117 aa9.99□□□□□ -0.81
CDH5-208ENST00000614547 B4E171 279 aa9.99□□□□□ -0.81
CDH5-208ENST00000614547 PFN1P07737 140 aaKnown RBP9.99□□□□□ -0.81
CDH5-208ENST00000614547 FKBP2P26885 142 aaKnown RBP9.99□□□□□ -0.81
CDH5-208ENST00000614547 TSPAN7P41732 249 aa9.99□□□□□ -0.81
CDH5-208ENST00000614547 CYB561P49447 251 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms