RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 IL22RA2Q969J5 263 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 CUL9Q8IWT3 2517 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A10PA6NDY2 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A18PA6NE21 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A16PA6NEW6 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A20PA6NIJ5 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A8PA6NJQ4 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A7PA6NKC0 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 TMEM210A6NLX4 147 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A22PA8MWA6 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A12PA8MX19 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A5PA8MXJ8 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A23PA8MXZ1 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 H7BYZ3 331 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 K7EM74 188 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A15PP0C7V4 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A13PP0C7W8 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A14PP0C7W9 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FAM90A24PP0C7X0 464 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 C20orf204Q6ZNR8 217 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 ZNF695Q8IW36 515 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 RBKSQ9H477 322 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 LPAR2Q9HBW0 351 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 Q9N2K0 584 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 DKK4Q9UBT3 224 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 FZR1Q9UM11 496 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 APC2O95996 2303 aa13.89□□□□□ -0.19
CNOT3-208ENST00000613073 CHST1O43916 411 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 HPRT1P00492 218 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 PPYP01298 95 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 MPV17P39210 176 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 PSG7Q13046 419 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 TMEM256Q8N2U0 113 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 MOB3AQ96BX8 217 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 OR5B12Q96R08 314 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 NAGKQ9UJ70 344 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 ACACAQ13085 2346 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 HEATR1Q9H583 2144 aaKnown RBP13.88□□□□□ -0.19
CNOT3-208ENST00000613073 NAPSAO96009 420 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 GRPP07492 148 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 INO80CQ6PI98 192 aaPredicted RBP13.88□□□□□ -0.19
CNOT3-208ENST00000613073 CXorf67Q86X51 503 aaPredicted RBP13.88□□□□□ -0.19
CNOT3-208ENST00000613073 LRTM2Q8N967 370 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 PPIAL4AQ9Y536 164 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 TRAV24A0A0B4J272 114 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 C3orf85A0A1B0GTC6 90 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 CDIPTO14735 213 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 NBL1P41271 181 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 HOXA4Q00056 320 aaPredicted RBP13.88□□□□□ -0.19
CNOT3-208ENST00000613073 IL24Q13007 206 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 TESK1Q15569 626 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 WDR31Q8NA23 367 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 SCCPDHQ8NBX0 429 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 RTL8AQ9BWD3 113 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 C11orf1Q9H5F2 150 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 PLSCR2Q9NRY7 297 aa13.88□□□□□ -0.19
CNOT3-208ENST00000613073 CISD1Q9NZ45 108 aaKnown RBP13.88□□□□□ -0.19
CNOT3-208ENST00000613073 TRAV39A0A0B4J263 110 aa13.87□□□□□ -0.19
CNOT3-208ENST00000613073 SIAH2O43255 324 aa13.87□□□□□ -0.19
CNOT3-208ENST00000613073 NUPR1O60356 82 aa13.87□□□□□ -0.19
CNOT3-208ENST00000613073 WDR1O75083 606 aa13.87□□□□□ -0.19
CNOT3-208ENST00000613073 ZNF726P1Q15940 193 aa13.87□□□□□ -0.19
CNOT3-208ENST00000613073 COA6Q5JTJ3 125 aaKnown RBP13.87□□□□□ -0.19
CNOT3-208ENST00000613073 TOMM20LQ6UXN7 152 aa13.87□□□□□ -0.19
CNOT3-208ENST00000613073 OR51G1Q8NGK1 321 aa13.87□□□□□ -0.19
CNOT3-208ENST00000613073 PAM16Q9Y3D7 125 aa13.87□□□□□ -0.19
CNOT3-208ENST00000613073 TAS2R30P59541 319 aa13.87□□□□□ -0.19
CNOT3-208ENST00000613073 KLF14Q8TD94 323 aaPredicted RBP13.87□□□□□ -0.19
CNOT3-208ENST00000613073 TMEM170AQ8WVE7 144 aa13.87□□□□□ -0.19
CNOT3-208ENST00000613073 DOCK11Q5JSL3 2073 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 CADP27708 2225 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 KIR2DL5BA0A0G2JN68 375 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 KIR2DL5BA0A0G2JPC4 375 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 TRDCB7Z8K6 153 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 J3QT63 122 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 TNFSF13O75888 250 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 UCP3P55916 312 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 IZUMO4Q1ZYL8 232 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 SEM1Q6ZVN7 128 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 KIR2DL5AQ8N109 375 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 RPRMLQ8N4K4 120 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 MS4A10Q96PG2 267 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 AHRRA9YTQ3 701 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 SIRPB1O00241 398 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 DEGS1O15121 323 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 COX5AP20674 150 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 BRS3P32247 399 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 FAM3BP58499 235 aaPredicted RBP13.86□□□□□ -0.19
CNOT3-208ENST00000613073 BSXQ3C1V8 233 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 STARD4Q96DR4 205 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 ACY3Q96HD9 319 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 ATP5SQ99766 215 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 CTDSP1Q9GZU7 261 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 PLK3Q9H4B4 646 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 OBP2BQ9NPH6 170 aa13.86□□□□□ -0.19
CNOT3-208ENST00000613073 AURKAIP1Q9NWT8 199 aaPredicted RBP13.86□□□□□ -0.19
CNOT3-208ENST00000613073 SMG1Q96Q15 3661 aaKnown RBP13.86□□□□□ -0.19
CNOT3-208ENST00000613073 IGKV1-6A0A0C4DH72 117 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 MPPED1O15442 326 aa13.85□□□□□ -0.19
CNOT3-208ENST00000613073 LINC00614P0C842 121 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms