RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 AGMATQ9BSE5 352 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 TET2Q6N021 2002 aaPredicted RBP11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 BMP5P22003 454 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 PTAFRP25105 342 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 TLE4Q04727 773 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 TCF15Q12870 199 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 LRRC75BQ2VPJ9 315 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZNF787Q6DD87 383 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 GATAD1Q8WUU5 269 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 ITLN1Q8WWA0 313 aa11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 SNRNP40Q96DI7 357 aaKnown RBP11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 WDR61Q9GZS3 305 aaKnown RBP11.72□□□□□ -0.53
PCDHGA3-202ENST00000612467 TRBV23-1A0A0A0MS06 115 aa11.71□□□□□ -0.53
PCDHGA3-202ENST00000612467 LRRC30A6NM36 301 aa11.71□□□□□ -0.53
PCDHGA3-202ENST00000612467 KLK10O43240 276 aa11.71□□□□□ -0.53
PCDHGA3-202ENST00000612467 TAGLN2P37802 199 aaKnown RBP11.71□□□□□ -0.53
PCDHGA3-202ENST00000612467 DLK1P80370 383 aa11.71□□□□□ -0.53
PCDHGA3-202ENST00000612467 MBNL2Q5VZF2 373 aaKnown RBP11.71□□□□□ -0.53
PCDHGA3-202ENST00000612467 ACSM6Q6P461 480 aa11.71□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZCCHC24Q8N2G6 241 aaKnown RBP11.71□□□□□ -0.53
PCDHGA3-202ENST00000612467 BIN3Q9NQY0 253 aa11.71□□□□□ -0.53
PCDHGA3-202ENST00000612467 GNG12Q9UBI6 72 aa11.71□□□□□ -0.53
PCDHGA3-202ENST00000612467 MBD3L4A6NDZ8 208 aaPredicted RBP11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 MBD3L3A6NE82 208 aaPredicted RBP11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 MBD3L5A6NJ08 208 aaPredicted RBP11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 FCGR3BO75015 233 aa11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 OR2C1O95371 312 aa11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 OR9G9P0C7N8 305 aa11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 P0C879 139 aa11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 RAB5AP20339 215 aa11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 MBD3L2Q8NHZ7 208 aaPredicted RBP11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 Q8TCH9 128 aa11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 QTRT1Q9BXR0 403 aaKnown RBP11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 SLC25A22Q9H936 323 aa11.71□□□□□ -0.54
PCDHGA3-202ENST00000612467 TRAV3A0A0B4J244 114 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 ZNF891A8MT65 544 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 CEACAM4O75871 244 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 ACAA1P09110 424 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 WNT2P09544 360 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 ZNF506Q5JVG8 444 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 TMEM14EPQ6UXP3 125 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 ZNF600Q6ZNG1 722 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 RPP25LQ8N5L8 163 aaKnown RBP11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 RBMXL3Q8N7X1 1067 aaKnown RBP11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 TAF15Q92804 592 aaKnown RBP eCLIP11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 EGLN1Q9GZT9 426 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 ZNRD1Q9P1U0 126 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 HSPB7Q9UBY9 170 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 LOC102723971A0A1B0GUV8 181 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 C1orf196B1AJZ1 125 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 H2BFWTQ7Z2G1 175 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 NBASA2RRP1 2371 aa11.7□□□□□ -0.54
PCDHGA3-202ENST00000612467 CUL9Q8IWT3 2517 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 A0A1B0GW64 132 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 MARCH11A6NNE9 402 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 RNF212BA8MTL3 300 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 CEBPZOSA8MTT3 80 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 SRRM5B3KS81 715 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 CYB5R3P00387 301 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 MT-ND4LP03901 98 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 CXCL1P09341 107 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 CD200P41217 278 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 RAB5BP61020 215 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 HBG1P69891 147 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 HBG2P69892 147 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 P2RY6Q15077 328 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 PRR7Q8TB68 274 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 DTD1Q8TEA8 209 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 CATR1Q13166 79 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 MRPL37Q9BZE1 423 aaKnown RBP11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 TLN1Q9Y490 2541 aaKnown RBP11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 TNCP24821 2201 aa11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 RAI1Q7Z5J4 1906 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA3-202ENST00000612467 PMS2P5A8MQ11 134 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 M0R1X1 148 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 PPIHO43447 177 aaKnown RBP11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 GPR12P47775 334 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 RHEBQ15382 184 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 GCSAMLQ5JQS6 135 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 MEGF10Q96KG7 1140 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 WASF3Q9UPY6 502 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 TACC2O95359 2948 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 TGIF2-C20orf24A0A0A6YYL0 155 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 SPINT2O43291 252 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 MYOD1P15172 320 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 NQO2P16083 231 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 EIF2S3LQ2VIR3 472 aaKnown RBP11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 FAM90A2PQ658T7 463 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 R3HDM4Q96D70 268 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 MUCL1Q96DR8 90 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 SSX3Q99909 188 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
PCDHGA3-202ENST00000612467 CRYAAP02489 173 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 FGF7P21781 194 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 DUTP33316 252 aaKnown RBP11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 MORN2Q502X0 79 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 PRSS33Q8NF86 280 aa11.67□□□□□ -0.54
PCDHGA3-202ENST00000612467 Q8WTZ3 238 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms