RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 MARCH11A6NNE9 402 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 USF1P22415 310 aaPredicted RBP10.6□□□□□ -0.71
CDH1-212ENST00000611625 OR5I1Q13606 314 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 LOC102723996A0A087X1L8 192 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 M0R296 226 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 KBTBD11O94819 623 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 NRN1LQ496H8 165 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 C18orf12Q96KH6 178 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 PARLQ9H300 379 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 ZNF703Q9H7S9 590 aaPredicted RBP10.6□□□□□ -0.71
CDH1-212ENST00000611625 SEBOXQ9HB31 216 aaPredicted RBP10.6□□□□□ -0.71
CDH1-212ENST00000611625 CYTL1Q9NRR1 136 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 CELA3AP09093 270 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 TIPARPQ7Z3E1 657 aaKnown RBP10.6□□□□□ -0.71
CDH1-212ENST00000611625 LILRB1Q8NHL6 650 aaPredicted RBP10.6□□□□□ -0.71
CDH1-212ENST00000611625 KLF14Q8TD94 323 aaPredicted RBP10.6□□□□□ -0.71
CDH1-212ENST00000611625 FAM117AQ9C073 453 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 OR51B2Q9Y5P1 312 aa10.6□□□□□ -0.71
CDH1-212ENST00000611625 ODAMA1E959 279 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 ACAA1P09110 424 aaPredicted RBP10.59□□□□□ -0.71
CDH1-212ENST00000611625 MIC13Q5XKP0 118 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 SPNS3Q6ZMD2 512 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 FA2HQ7L5A8 372 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 C1orf174Q8IYL3 243 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 OR4F17Q8NGA8 305 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 OR1L8Q8NGR8 309 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 OR2T6Q8NHC8 308 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 BARX1Q9HBU1 254 aaPredicted RBP10.59□□□□□ -0.71
CDH1-212ENST00000611625 IL19Q9UHD0 177 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 TMEM56-RWDD3S4R434 201 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 PLXNA2O75051 1894 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 ICE1Q9Y2F5 2266 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 SSX7Q7RTT5 188 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 TUBA4BQ9H853 241 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 IL36RNQ9UBH0 155 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 COX7A1P24310 79 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 TNXAQ16473 311 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 OR1B1Q8NGR6 318 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 RND1Q92730 232 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 FLYWCH2Q96CP2 140 aaKnown RBP10.59□□□□□ -0.71
CDH1-212ENST00000611625 GGACTQ9BVM4 153 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 IL17BQ9UHF5 180 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 AUP1Q9Y679 476 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 PLXND1Q9Y4D7 1925 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 TMEM250H0YL14 139 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 RHBDL1O75783 438 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 P2RY6Q15077 328 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 SAP30LQ9HAJ7 183 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 DMRT1Q9Y5R6 373 aa10.59□□□□□ -0.71
CDH1-212ENST00000611625 TRBV23-1A0A0A0MS06 115 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 J3QW42 95 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 LRP11Q86VZ4 500 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 TGIF2LYQ8IUE0 185 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 TGIF2LXQ8IUE1 241 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 OR4X1Q8NH49 305 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 SIGLEC12Q96PQ1 595 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 OR2V2Q96R30 315 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 AAMDCQ9H7C9 122 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 CLDN16Q9Y5I7 305 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 LRRC3CA6NJW4 275 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 HOXB1P14653 301 aaPredicted RBP10.58□□□□□ -0.72
CDH1-212ENST00000611625 CD82P27701 267 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 ZNF385CQ66K41 422 aaPredicted RBP10.58□□□□□ -0.72
CDH1-212ENST00000611625 RNF144BQ7Z419 303 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 SRD5A3Q9H8P0 318 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 IGKV1D-13A0A0B4J2D9 117 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 TCAPO15273 167 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 IGKV1-13P0DP09 117 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 LYZP61626 148 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 RNF151Q2KHN1 245 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 ABLIM2Q6H8Q1 611 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 TBX15Q96SF7 602 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 PROB1E7EW31 1015 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 PTGDSP41222 190 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 PRRX1P54821 245 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 SRSF4Q08170 494 aaKnown RBP10.58□□□□□ -0.72
CDH1-212ENST00000611625 RTN4RL2Q86UN3 420 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 PAM16Q9Y3D7 125 aa10.58□□□□□ -0.72
CDH1-212ENST00000611625 EP300Q09472 2414 aaPredicted RBP10.57□□□□□ -0.72
CDH1-212ENST00000611625 PRR33A8MZF0 331 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 QRFPP83859 136 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 ARL16Q0P5N6 197 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 FAM216AQ8WUB2 273 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 PHF3Q92576 2039 aaKnown RBP10.57□□□□□ -0.72
CDH1-212ENST00000611625 NOTCH4Q99466 2003 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 K7ESF4 209 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 GCGP01275 180 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 CRYGSP22914 178 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 HTR1DP28221 377 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 LRRC75BQ2VPJ9 315 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 C10orf113Q5VZT2 155 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 GCSAMQ8N6F7 178 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 OPN3Q9H1Y3 402 aaPredicted RBP10.57□□□□□ -0.72
CDH1-212ENST00000611625 TMEM140Q9NV12 185 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 ONECUT1Q9UBC0 465 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 SPAARA0A1B0GVQ0 90 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 AGAP20933 346 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 DDTP30046 118 aa10.57□□□□□ -0.72
CDH1-212ENST00000611625 RPL31P62899 125 aaKnown RBP10.57□□□□□ -0.72
CDH1-212ENST00000611625 Q6ZN92 141 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms