RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 JPT1Q9UK76 154 aa13.43□□□□□ -0.26
TNXB-208ENST00000611016 ELF5Q9UKW6 265 aaPredicted RBP13.43□□□□□ -0.26
TNXB-208ENST00000611016 CELA3AP09093 270 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 ZNF250P15622 560 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 PRNTQ86SH4 94 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 OR10J6PQ8NGY7 276 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 ABHD17AQ96GS6 310 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 GPR132Q9UNW8 380 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 PXMP4Q9Y6I8 212 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 ZNF207O43670 478 aaKnown RBP13.42□□□□□ -0.26
TNXB-208ENST00000611016 TMEM78Q5T7P6 136 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 SPANXN1Q5VSR9 72 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 DLL3Q9NYJ7 618 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 RHBDL1O75783 438 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 IGKV3-11P04433 115 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 IGKV1D-42A0A075B6H8 117 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 RECKO95980 971 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 RELBQ01201 579 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 AQP3Q92482 292 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 LEAP2Q969E1 77 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 FUT9Q9Y231 359 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 LOC390937A0A1W2PQ73 354 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 TMEM189A5PLL7 270 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 PKIAP61925 76 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 IFITM3Q01628 133 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 ABHD12Q8N2K0 398 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 COPS9Q8WXC6 57 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 COL25A1Q9BXS0 654 aaPredicted RBP13.42□□□□□ -0.26
TNXB-208ENST00000611016 ZNF430Q9H8G1 570 aaPredicted RBP13.42□□□□□ -0.26
TNXB-208ENST00000611016 FAM206AQ9NX38 181 aa13.42□□□□□ -0.26
TNXB-208ENST00000611016 RPL8P62917 257 aaKnown RBP13.41□□□□□ -0.26
TNXB-208ENST00000611016 MRPL54Q6P161 138 aaKnown RBP13.41□□□□□ -0.26
TNXB-208ENST00000611016 LDLRAD3Q86YD5 345 aa13.41□□□□□ -0.26
TNXB-208ENST00000611016 FAM216AQ8WUB2 273 aa13.41□□□□□ -0.26
TNXB-208ENST00000611016 ACAA1P09110 424 aaPredicted RBP13.41□□□□□ -0.26
TNXB-208ENST00000611016 ZNF137PP52743 207 aa13.41□□□□□ -0.26
TNXB-208ENST00000611016 SUCLG1P53597 346 aaKnown RBP13.41□□□□□ -0.26
TNXB-208ENST00000611016 ACSF3Q4G176 576 aaPredicted RBP13.41□□□□□ -0.26
TNXB-208ENST00000611016 CD200R1LQ6Q8B3 271 aa13.41□□□□□ -0.26
TNXB-208ENST00000611016 C16orf92Q96LL3 132 aa13.41□□□□□ -0.26
TNXB-208ENST00000611016 AKIRIN1Q9H9L7 192 aaPredicted RBP13.41□□□□□ -0.26
TNXB-208ENST00000611016 FOXD3Q9UJU5 478 aaPredicted RBP13.41□□□□□ -0.26
TNXB-208ENST00000611016 SS18L1O75177 396 aaPredicted RBP13.41□□□□□ -0.26
TNXB-208ENST00000611016 SEC16AO15027 2179 aa13.41□□□□□ -0.26
TNXB-208ENST00000611016 B9A039 149 aa13.41□□□□□ -0.26
TNXB-208ENST00000611016 IER3P46695 156 aa13.41□□□□□ -0.26
TNXB-208ENST00000611016 FAM27E3Q08E93 113 aa13.41□□□□□ -0.26
TNXB-208ENST00000611016 TMEM238LA0A1B0GVL6 79 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 A6NJY4 79 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 LSM10Q969L4 123 aaKnown RBP13.4□□□□□ -0.26
TNXB-208ENST00000611016 ZNF703Q9H7S9 590 aaPredicted RBP13.4□□□□□ -0.26
TNXB-208ENST00000611016 RBBP6Q7Z6E9 1792 aaKnown RBP13.4□□□□□ -0.26
TNXB-208ENST00000611016 PCSK4Q6UW60 755 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 Q6ZT83 130 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 VWCEQ96DN2 955 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 NPIPB6E9PJ23 425 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 SLC25A17O43808 307 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 SRSF9Q13242 221 aaKnown RBP eCLIP13.4□□□□□ -0.26
TNXB-208ENST00000611016 UBE2V2Q15819 145 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 TMEM54Q969K7 222 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 TLNRD1Q9H1K6 362 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 APC2O95996 2303 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 UCP3P55916 312 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 TM4SF20Q53R12 229 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 SLC16A13Q7RTY0 426 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 TMEM252Q8N6L7 170 aa13.4□□□□□ -0.26
TNXB-208ENST00000611016 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.39□□□□□ -0.27
TNXB-208ENST00000611016 PTGDSP41222 190 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 APCDD1LQ8NCL9 501 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 OR2D3Q8NGH3 330 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 CHCHD2Q9Y6H1 151 aaPredicted RBP13.39□□□□□ -0.27
TNXB-208ENST00000611016 ZNF729A6NN14 1252 aaPredicted RBP13.39□□□□□ -0.27
TNXB-208ENST00000611016 RHOVQ96L33 236 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 KCNAB3O43448 404 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 HLA-DQA1P01909 254 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 APOBEC3AP31941 199 aaPredicted RBP13.39□□□□□ -0.27
TNXB-208ENST00000611016 ZXDCQ2QGD7 858 aaPredicted RBP13.39□□□□□ -0.27
TNXB-208ENST00000611016 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 IGHV3OR16-12A0A075B7B8 117 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 NUBP1P53384 320 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 SLC35E4Q6ICL7 350 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 LRRC75AQ8NAA5 344 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 AURKAIP1Q9NWT8 199 aaPredicted RBP13.39□□□□□ -0.27
TNXB-208ENST00000611016 A0A087X0M5 115 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 A0A1B0GX30 115 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 CRXO43186 299 aaPredicted RBP13.39□□□□□ -0.27
TNXB-208ENST00000611016 S1PR2O95136 353 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 TMEM186Q96B77 213 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 MRPL32Q9BYC8 188 aaKnown RBP13.39□□□□□ -0.27
TNXB-208ENST00000611016 LINC00470Q9BZP3 86 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 PRO1933Q9H354 126 aa13.39□□□□□ -0.27
TNXB-208ENST00000611016 CGB1A6NKQ9 187 aa13.38□□□□□ -0.27
TNXB-208ENST00000611016 IFITM10A6NMD0 228 aa13.38□□□□□ -0.27
TNXB-208ENST00000611016 OR2A4O95047 310 aa13.38□□□□□ -0.27
TNXB-208ENST00000611016 C10orf128Q5T292 105 aa13.38□□□□□ -0.27
TNXB-208ENST00000611016 TMEM45BQ96B21 275 aa13.38□□□□□ -0.27
TNXB-208ENST00000611016 AQP10Q96PS8 301 aa13.38□□□□□ -0.27
TNXB-208ENST00000611016 OR2A7Q96R45 310 aa13.38□□□□□ -0.27
TNXB-208ENST00000611016 SCN10AQ9Y5Y9 1956 aa13.38□□□□□ -0.27
TNXB-208ENST00000611016 TRAV34A0A0B4J273 112 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms