RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ZNF705BP0CI00 300 aaPredicted RBP17.16■□□□□ 0.34
SSBP3-216ENST00000610401 PRAMEF6Q5VXH4 476 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 ZNF114Q8NC26 417 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 DTD1Q8TEA8 209 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 MBD3L1Q8WWY6 194 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 METRNQ9UJH8 293 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 KBTBD11O94819 623 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 RAC2P15153 192 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 NPPCP23582 126 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 RND2P52198 227 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 NUBP1P53384 320 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 PMS2CLQ68D20 193 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 LURAP1Q96LR2 239 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 HINT2Q9BX68 163 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 TNCP24821 2201 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 TACC2O95359 2948 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 DUXBA0A1W2PPF3 345 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 LRP5LA4QPB2 252 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 NUPR1O60356 82 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 FABP6P51161 128 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 OR2T10Q8NGZ9 312 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 SSMEM1Q8WWF3 244 aa17.16■□□□□ 0.34
SSBP3-216ENST00000610401 TRBV24-1A0A075B6N3 115 aa17.15■□□□□ 0.34
SSBP3-216ENST00000610401 SLC25A6P12236 298 aa17.15■□□□□ 0.34
SSBP3-216ENST00000610401 Q6P435 159 aa17.15■□□□□ 0.34
SSBP3-216ENST00000610401 NINJ1Q92982 152 aa17.15■□□□□ 0.34
SSBP3-216ENST00000610401 C5orf30Q96GV9 206 aa17.15■□□□□ 0.34
SSBP3-216ENST00000610401 SRD5A3Q9H8P0 318 aa17.15■□□□□ 0.34
SSBP3-216ENST00000610401 DVL1O14640 695 aa17.15■□□□□ 0.34
SSBP3-216ENST00000610401 DNPH1O43598 174 aa17.15■□□□□ 0.34
SSBP3-216ENST00000610401 SERF2P84101 59 aa17.15■□□□□ 0.34
SSBP3-216ENST00000610401 ZNF703Q9H7S9 590 aaPredicted RBP17.15■□□□□ 0.34
SSBP3-216ENST00000610401 KALRNO60229 2985 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 C6orf15Q6UXA7 325 aaPredicted RBP17.14■□□□□ 0.33
SSBP3-216ENST00000610401 H2BFWTQ7Z2G1 175 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 LEAP2Q969E1 77 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 PKDREJQ9NTG1 2253 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 PCNX1Q96RV3 2341 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 TRAV1-1A0A0B4J248 108 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 C12orf77C9JDV5 145 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 WISP2O76076 250 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 IL18BPO95998 194 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 PRR31Q5SQ13 230 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 CYP2G1PQ6ZSU1 146 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 KCNIP1Q9NZI2 227 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A10PA6NDY2 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A18PA6NE21 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A16PA6NEW6 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A20PA6NIJ5 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A8PA6NJQ4 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A7PA6NKC0 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A22PA8MWA6 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A12PA8MX19 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A5PA8MXJ8 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A23PA8MXZ1 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A15PP0C7V4 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A13PP0C7W8 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A14PP0C7W9 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 FAM90A24PP0C7X0 464 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 SLC35B1P78383 322 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 DPPA3Q6W0C5 159 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 CDH20Q9HBT6 801 aa17.14■□□□□ 0.33
SSBP3-216ENST00000610401 SLC31A2O15432 143 aa17.13■□□□□ 0.33
SSBP3-216ENST00000610401 JOSD1Q15040 202 aaPredicted RBP17.13■□□□□ 0.33
SSBP3-216ENST00000610401 SLC25A40Q8TBP6 338 aa17.13■□□□□ 0.33
SSBP3-216ENST00000610401 GALMQ96C23 342 aa17.13■□□□□ 0.33
SSBP3-216ENST00000610401 RIMS4Q9H426 269 aaPredicted RBP17.13■□□□□ 0.33
SSBP3-216ENST00000610401 FOXJ2Q9P0K8 574 aa17.13■□□□□ 0.33
SSBP3-216ENST00000610401 SERPINA7P05543 415 aa17.13■□□□□ 0.33
SSBP3-216ENST00000610401 RPL29P47914 159 aaKnown RBP17.13■□□□□ 0.33
SSBP3-216ENST00000610401 HBZP02008 142 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 Q6ZR03 302 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 CNEP1R1Q8N9A8 125 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 Q8NFD4 153 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 PINX1Q96BK5 328 aaKnown RBP17.12■□□□□ 0.33
SSBP3-216ENST00000610401 NPCDR1Q9BY65 106 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 IL17BQ9UHF5 180 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 ZNF318Q5VUA4 2279 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 CSMD1Q96PZ7 3565 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 A0A1W2PPV4 95 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 LINC00473A8K010 186 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 J3QT63 122 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 PAX5Q02548 391 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 Q6ZS49 121 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 DDA1Q9BW61 102 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 B4GALT7Q9UBV7 327 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 TRAPPC1Q9Y5R8 145 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 SH2D1BO14796 132 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 HAND1O96004 215 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 HRASP01112 189 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 FRMD6-AS1P0C7T7 363 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 ZNF497Q6ZNH5 498 aa17.12■□□□□ 0.33
SSBP3-216ENST00000610401 PSMG3Q9BT73 122 aaPredicted RBP17.12■□□□□ 0.33
SSBP3-216ENST00000610401 QTRT1Q9BXR0 403 aaKnown RBP17.12■□□□□ 0.33
SSBP3-216ENST00000610401 ACTR3CQ9C0K3 210 aaPredicted RBP17.12■□□□□ 0.33
SSBP3-216ENST00000610401 SLC17A3O00476 420 aa17.11■□□□□ 0.33
SSBP3-216ENST00000610401 FCGR3BO75015 233 aa17.11■□□□□ 0.33
SSBP3-216ENST00000610401 COX5AP20674 150 aa17.11■□□□□ 0.33
SSBP3-216ENST00000610401 GCH1P30793 250 aa17.11■□□□□ 0.33
SSBP3-216ENST00000610401 ARR3P36575 388 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms