RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 SMIM19Q96E16 107 aa10.64□□□□□ -0.71
HCG18-245ENST00000602550 WDR89Q96FK6 387 aaPredicted RBP10.64□□□□□ -0.71
HCG18-245ENST00000602550 PHB2Q99623 299 aa10.64□□□□□ -0.71
HCG18-245ENST00000602550 C11orf54Q9H0W9 315 aaPredicted RBP10.64□□□□□ -0.71
HCG18-245ENST00000602550 GHRLQ9UBU3 117 aa10.64□□□□□ -0.71
HCG18-245ENST00000602550 hCG_2014768A0A024R1R8 64 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 TRAV8-7A0A075B6U6 113 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 FAM223BA6NKX1 122 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 SPRY2O43597 315 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 PROP1O75360 226 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 ALPLP05186 524 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 OR9G9P0C7N8 305 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 MAP2K4P45985 399 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 EWSR1Q01844 656 aaKnown RBP eCLIP10.63□□□□□ -0.71
HCG18-245ENST00000602550 ZIK1Q3SY52 487 aaPredicted RBP10.63□□□□□ -0.71
HCG18-245ENST00000602550 Q6ZWC4 215 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 MOB1BQ7L9L4 216 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 FAM223AQ8IWN6 122 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 SVOPQ8N4V2 548 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 ADAD2Q8NCV1 583 aaKnown RBP10.63□□□□□ -0.71
HCG18-245ENST00000602550 OR52B4Q8NGK2 314 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 FAAP24Q9BTP7 215 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 CHMP1AQ9HD42 196 aaPredicted RBP10.63□□□□□ -0.71
HCG18-245ENST00000602550 SLC35D1Q9NTN3 355 aa10.63□□□□□ -0.71
HCG18-245ENST00000602550 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.62□□□□□ -0.71
HCG18-245ENST00000602550 MSGN1A6NI15 193 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 LGALS9O00182 355 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 RBMXL2O75526 392 aaKnown RBP10.62□□□□□ -0.71
HCG18-245ENST00000602550 IGLV2-23P01705 113 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 CRYGBP07316 175 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 RHOGP84095 191 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 EXOSC2Q13868 293 aaKnown RBP10.62□□□□□ -0.71
HCG18-245ENST00000602550 YIF1BQ5BJH7 314 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 ZNF880Q6PDB4 577 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 OR13C5Q8NGS8 318 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 RHOXF1Q8NHV9 184 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 SETD6Q8TBK2 473 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 PTX4Q96A99 478 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 CYYR1Q96J86 154 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 UQCC2Q9BRT2 126 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 RIMS4Q9H426 269 aaPredicted RBP10.62□□□□□ -0.71
HCG18-245ENST00000602550 AKIP1Q9NQ31 210 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 BABAM2Q9NXR7 383 aa10.62□□□□□ -0.71
HCG18-245ENST00000602550 ZNF230Q9UIE0 474 aaPredicted RBP10.62□□□□□ -0.71
HCG18-245ENST00000602550 MPPED1O15442 326 aa10.61□□□□□ -0.71
HCG18-245ENST00000602550 NAPSAO96009 420 aa10.61□□□□□ -0.71
HCG18-245ENST00000602550 APOC4P55056 127 aa10.61□□□□□ -0.71
HCG18-245ENST00000602550 LINC00205P59089 165 aa10.61□□□□□ -0.71
HCG18-245ENST00000602550 ZNF57Q68EA5 555 aaPredicted RBP10.61□□□□□ -0.71
HCG18-245ENST00000602550 C6orf201Q7Z4U5 140 aa10.61□□□□□ -0.71
HCG18-245ENST00000602550 PHLDA1Q8WV24 401 aaPredicted RBP10.61□□□□□ -0.71
HCG18-245ENST00000602550 HARBI1Q96MB7 349 aa10.61□□□□□ -0.71
HCG18-245ENST00000602550 FGF20Q9NP95 211 aaPredicted RBP10.61□□□□□ -0.71
HCG18-245ENST00000602550 MGAT4AQ9UM21 535 aa10.61□□□□□ -0.71
HCG18-245ENST00000602550 EXOSC1Q9Y3B2 195 aaKnown RBP10.61□□□□□ -0.71
HCG18-245ENST00000602550 TRBV5-7A0A0A0MS05 114 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 TRBV9A0A0B4J1U6 114 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 UBE2CO00762 179 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 GGCTO75223 188 aaKnown RBP10.6□□□□□ -0.71
HCG18-245ENST00000602550 UBBP0CG47 229 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 APELAP0DMC3 54 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 CBLN1P23435 193 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 DCKP27707 260 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 TAGLNQ01995 201 aaKnown RBP10.6□□□□□ -0.71
HCG18-245ENST00000602550 CBX3Q13185 183 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 OR2G6Q5TZ20 316 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 GLT8D1Q68CQ7 371 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 TMEM61Q8N0U2 210 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 NKAIN3Q8N8D7 197 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.6□□□□□ -0.71
HCG18-245ENST00000602550 NECAP1Q8NC96 275 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 KCNG3Q8TAE7 436 aa10.6□□□□□ -0.71
HCG18-245ENST00000602550 TRBV6-6A0A0A6YYG2 114 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 A0A1W2PPK0 400 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 M0R1X1 148 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 EI24O14681 340 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 SHOXO15266 292 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 ETV1P50549 477 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 RPS11P62280 158 aaKnown RBP eCLIP10.59□□□□□ -0.71
HCG18-245ENST00000602550 TM4SF20Q53R12 229 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 C1orf146Q5VVC0 180 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 GPHB5Q86YW7 130 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 SLC29A1Q99808 456 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 PLEKHJ1Q9NW61 149 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 OR1A1Q9P1Q5 309 aa10.59□□□□□ -0.71
HCG18-245ENST00000602550 TRAV25A0A0B4J276 109 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 ERICH4A6NGS2 130 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 OR2C1O95371 312 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 EDN2P20800 178 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 RPS27AP62979 156 aaKnown RBP10.58□□□□□ -0.72
HCG18-245ENST00000602550 HLA-DRB3P79483 266 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 TNXAQ16473 311 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 DEFB135Q30KP9 77 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 VMA21Q3ZAQ7 101 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 FAM106AQ4KMX7 169 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 TMEM177Q53S58 311 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 TEX45Q8NA69 505 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 SRSF12Q8WXF0 261 aaKnown RBP10.58□□□□□ -0.72
HCG18-245ENST00000602550 RNF183Q96D59 192 aa10.58□□□□□ -0.72
HCG18-245ENST00000602550 TMEM59Q9BXS4 323 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms