RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 LINC00596Q86U02 117 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 WFDC8Q8IUA0 241 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 RAB39BQ96DA2 213 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 COQ2Q96H96 371 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 VSIRQ9H7M9 311 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 DKK4Q9UBT3 224 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 GAB2Q9UQC2 676 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 YLPM1P49750 1951 aaKnown RBP9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 TM4SF5O14894 197 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 TNFSF13O75888 250 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 DLK1P80370 383 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 ARL16Q0P5N6 197 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 EDARADDQ8WWZ3 215 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 SNX22Q96L94 193 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 OR51M1Q9H341 326 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 KMT2EQ8IZD2 1858 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 A0A0U1RQK1 487 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 FCGR3BO75015 233 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 PITX3O75364 302 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 PRDX2P32119 198 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 MDH2P40926 338 aaKnown RBP9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 PAX9P55771 341 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 RND3P61587 244 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 FOXC1Q12948 553 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 HMGN3Q15651 99 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZNF585BQ52M93 769 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 WSB1Q9Y6I7 421 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 IGKV3-15P01624 115 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 ERVK11-1P61568 191 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 MOB1BQ7L9L4 216 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 ITLN1Q8WWA0 313 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 ATP5SQ99766 215 aa9.67□□□□□ -0.86
ARHGEF1-220ENST00000600274 RBFOX3A6NFN3 312 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 CD5P06127 495 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZNF146Q15072 292 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 ADIRFQ15847 76 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 DUX4L9Q6RFH8 374 aaPredicted RBP9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZNF474Q6S9Z5 364 aaPredicted RBP9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 UNQ6494/PRO21346Q6UXR6 183 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 SEM1Q6ZVN7 128 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 C11orf53Q8IXP5 236 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 WFIKKN1Q96NZ8 548 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 CHD3Q12873 2000 aaKnown RBP9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 TACC2O95359 2948 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 M0R1X1 148 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 SPINT2O43291 252 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 IGLV2-14P01704 120 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 PCP4P48539 62 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 GNG10P50151 68 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 CCL8P80075 99 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 SPNS3Q6ZMD2 512 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 H2BFWTQ7Z2G1 175 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 CD177Q8N6Q3 437 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 RYDENQ9NUL5 291 aaKnown RBP9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 STRAPQ9Y3F4 350 aaKnown RBP9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 OPN1MWP04001 364 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 OPN1MW2P0DN77 364 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 OPN1MW3P0DN78 364 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 GPX4P36969 197 aaPredicted RBP9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 GPR12P47775 334 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 ERVFRD-1P60508 538 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 Q6ZS49 121 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 SDSLQ96GA7 329 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 CABLES2Q9BTV7 478 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZNF665Q9H7R5 613 aa9.66□□□□□ -0.86
ARHGEF1-220ENST00000600274 A0A1B0GU03 582 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 OOEPA6NGQ2 149 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 AHRRA9YTQ3 701 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZG16O60844 167 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 CYB5R3P00387 301 aaPredicted RBP9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 RPS23P62266 143 aaKnown RBP9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 BAXQ07812 192 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 CATR1Q13166 79 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 RPL39P5Q59GN2 51 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 TGIF2LYQ8IUE0 185 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 ODF3L1Q8IXM7 274 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 RPUSD4Q96CM3 377 aaKnown RBP9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 AURKAIP1Q9NWT8 199 aaPredicted RBP9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 WIPI2Q9Y4P8 454 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 TMEM210A6NLX4 147 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 K7N7A8 449 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 KLF3P57682 345 aaPredicted RBP9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 SSTP61278 116 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 WDR25Q64LD2 544 aaPredicted RBP9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 C22orf34Q6ZV56 151 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 TGIF2LXQ8IUE1 241 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 OR4C12Q96R67 309 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 RBKSQ9H477 322 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 RNF115Q9Y4L5 304 aa9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 KLF2Q9Y5W3 355 aaPredicted RBP9.65□□□□□ -0.86
ARHGEF1-220ENST00000600274 SLC38A11Q08AI6 406 aa9.65□□□□□ -0.87
ARHGEF1-220ENST00000600274 GAMTQ14353 236 aa9.65□□□□□ -0.87
ARHGEF1-220ENST00000600274 GNPNAT1Q96EK6 184 aaPredicted RBP9.65□□□□□ -0.87
ARHGEF1-220ENST00000600274 RAB40CQ96S21 281 aa9.65□□□□□ -0.87
ARHGEF1-220ENST00000600274 SLC25A22Q9H936 323 aa9.65□□□□□ -0.87
ARHGEF1-220ENST00000600274 RPRMQ9NS64 109 aa9.65□□□□□ -0.87
ARHGEF1-220ENST00000600274 BTBD17A6NE02 478 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 TCF15Q12870 199 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 PYY3Q5JQD4 70 aa9.64□□□□□ -0.87
ARHGEF1-220ENST00000600274 UTF1Q5T230 341 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms