RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 DSCAML1Q8TD84 2053 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 IGKV1D-13A0A0B4J2D9 117 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 NPIPB11E5RHQ5 1161 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 MPPED1O15442 326 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 NDUFS7O75251 213 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 IGKV1-13P0DP09 117 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 DAOP14920 347 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 TLE4Q04727 773 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 CLEC9AQ6UXN8 241 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 LFNGQ8NES3 379 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 RFESDQ8TAC1 157 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 GALMQ96C23 342 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 SPIN2AQ99865 258 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 SPIN2BQ9BPZ2 258 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 PBDC1Q9BVG4 233 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 SCRT1Q9BWW7 348 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 CTSZQ9UBR2 303 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 NDUFB7P17568 137 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 IL2RGP31785 369 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 RND3P61587 244 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 SLC35G3Q8N808 338 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 ZNF565Q8N9K5 539 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 ABHD14BQ96IU4 210 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 PARP12Q9H0J9 701 aaKnown RBP12.55□□□□□ -0.4
VRK3-218ENST00000600031 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 COA4Q9NYJ1 87 aa12.55□□□□□ -0.4
VRK3-218ENST00000600031 SLC25A10Q9UBX3 287 aaPredicted RBP12.55□□□□□ -0.4
VRK3-218ENST00000600031 HSPA12AO43301 675 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 IGHV2-70P01814 119 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 PRH1P02810 166 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 GZMHP20718 246 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 GNRHRP30968 328 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 MRPS11P82912 194 aaKnown RBP12.54□□□□□ -0.4
VRK3-218ENST00000600031 SP5Q6BEB4 398 aaPredicted RBP12.54□□□□□ -0.4
VRK3-218ENST00000600031 TCF23Q7RTU1 214 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 OR52L2PQ8NGH6 319 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 C14orf79Q96F83 325 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 TP53RKQ96S44 253 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 EIF5A2Q9GZV4 153 aaKnown RBP12.54□□□□□ -0.4
VRK3-218ENST00000600031 TMEM222Q9H0R3 208 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 RPS10P5Q9NQ39 176 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 OR6C3Q9NZP0 311 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 KAAG1Q9UBP8 84 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 OR2W1Q9Y3N9 320 aa12.54□□□□□ -0.4
VRK3-218ENST00000600031 A0A1B0GW64 132 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 DUXBA0A1W2PPF3 345 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 CLEC18AA5D8T8 446 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 PCP4L1A6NKN8 68 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 CGB3P0DN86 165 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 CGB7P0DN87 165 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 CEACAM6P40199 344 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 EWSR1Q01844 656 aaKnown RBP eCLIP12.53□□□□□ -0.4
VRK3-218ENST00000600031 NHLH2Q02577 135 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 ZNF266Q14584 549 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 TRAT1Q6PIZ9 186 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 OR2C3Q8N628 320 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 CLEC18CQ8NCF0 446 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 TMEM56Q96MV1 263 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 SMDT1Q9H4I9 107 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 C11orf1Q9H5F2 150 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 TMEM56-RWDD3S4R434 201 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 C1orf196B1AJZ1 125 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 OVOL3O00110 214 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 FSTL3O95633 263 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 MT-ND4LP03901 98 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 PLA2G2AP14555 144 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 SFT2D1Q8WV19 159 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 CLCC1Q96S66 551 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 C12orf57Q99622 126 aa12.53□□□□□ -0.4
VRK3-218ENST00000600031 UBE2J1Q9Y385 318 aaPredicted RBP12.53□□□□□ -0.4
VRK3-218ENST00000600031 IGHV3-43A0A0B4J1X8 118 aa12.52□□□□□ -0.4
VRK3-218ENST00000600031 DVL1O14640 695 aa12.52□□□□□ -0.4
VRK3-218ENST00000600031 SPINT2O43291 252 aa12.52□□□□□ -0.4
VRK3-218ENST00000600031 NDUFB3O43676 98 aa12.52□□□□□ -0.4
VRK3-218ENST00000600031 IGHV3-43DP0DP04 118 aa12.52□□□□□ -0.4
VRK3-218ENST00000600031 NKX2-1P43699 371 aaPredicted RBP12.52□□□□□ -0.4
VRK3-218ENST00000600031 LTC4SQ16873 150 aa12.52□□□□□ -0.4
VRK3-218ENST00000600031 C17orf58Q2M2W7 97 aa12.52□□□□□ -0.4
VRK3-218ENST00000600031 ZNF695Q8IW36 515 aa12.52□□□□□ -0.4
VRK3-218ENST00000600031 SLC25A31Q9H0C2 315 aa12.52□□□□□ -0.4
VRK3-218ENST00000600031 CCL28Q9NRJ3 127 aa12.52□□□□□ -0.4
VRK3-218ENST00000600031 C7orf77A4D0Y5 90 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 PPIHO43447 177 aaKnown RBP12.52□□□□□ -0.41
VRK3-218ENST00000600031 AKIRIN2Q53H80 203 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 AWAT1Q58HT5 328 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 LRRC10Q5BKY1 277 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 ZNF818PQ6ZRF7 136 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 HSD17B11Q8NBQ5 300 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 OR10V1Q8NGI7 309 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 C2CD4CQ8TF44 421 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 IGFBPL1Q8WX77 278 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 HIST1H2BAQ96A08 127 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 SLC35B3Q9H1N7 401 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 SH3BGRL3Q9H299 93 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 CALYQ9NYX4 217 aa12.52□□□□□ -0.41
VRK3-218ENST00000600031 TRGV10A0A0A0MS01 117 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 UMAD1C9J7I0 102 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 HSD17B6O14756 317 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 PITX3O75364 302 aa12.51□□□□□ -0.41
VRK3-218ENST00000600031 MMP9P14780 707 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms