RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ZNF596Q8TC21 504 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 IL1F10Q8WWZ1 152 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 AJUBAQ96IF1 538 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 C7orf50Q9BRJ6 194 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 PRSS22Q9GZN4 317 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 METTL8Q9H825 291 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 OR2S2Q9NQN1 319 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 EHFQ9NZC4 300 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 TBC1D24Q9ULP9 559 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 IGHV3-43A0A0B4J1X8 118 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 ITGB1BP1O14713 200 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 IGHV3-43DP0DP04 118 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 CEACAM6P40199 344 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 INPP1P49441 399 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 ASAH1Q13510 395 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 TCTEX1D4Q5JR98 221 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 LHFPL1Q86WI0 220 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 ARRDC1Q8N5I2 433 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 C8orf31Q8N9H6 132 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 TMEM133Q9H2Q1 129 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 SLC2A8Q9NY64 477 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 SLC23A1Q9UHI7 598 aa11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 LSM4Q9Y4Z0 139 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 TSSC4Q9Y5U2 329 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-218ENST00000598907 NAP1L6A6NFF2 107 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 NFYBP25208 207 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 FCGR2CP31995 323 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 FAUP35544 74 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 PPP1CCP36873 323 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 RAB13P51153 203 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 ZNF134P52741 427 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 LTC4SQ16873 150 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 FAAP20Q6NZ36 180 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 ZNF782Q6ZMW2 699 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 MRPL41Q8IXM3 137 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 LINC00311Q8N616 119 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 OR11H6Q8NGC7 330 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 OR56B4Q8NH76 319 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 PIFOQ8TCI5 191 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 PARP12Q9H0J9 701 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 MEGF9Q9H1U4 602 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 RDH8Q9NYR8 311 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 GNG12Q9UBI6 72 aa11.03□□□□□ -0.64
SHKBP1-218ENST00000598907 IGHV2-26A0A0B4J1V2 119 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 DISC1C4P0D8 188 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 HSPA12AO43301 675 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 LYRM1O43325 122 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 RGS11O94810 467 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 IGLV1-47P01700 117 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 AMY2AP04746 511 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 NFYAP23511 347 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 BTCP35070 178 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 AANATQ16613 207 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 CT45A1Q5HYN5 189 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 AADACL3Q5VUY0 350 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 SLC25A48Q6ZT89 311 aaKnown RBP11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 ABHD12Q8N2K0 398 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 OR10V1Q8NGI7 309 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 OR6F1Q8NGZ6 308 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 CT45A3Q8NHU0 189 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 LEAP2Q969E1 77 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 MRGPRFQ96AM1 343 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 GINS4Q9BRT9 223 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 AGMATQ9BSE5 352 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 ZNF2Q9BSG1 426 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 C11orf54Q9H0W9 315 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 HEXA-AS1Q9H8Q6 139 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 PSG11Q9UQ72 335 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 TCF19Q9Y242 345 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 OR2W1Q9Y3N9 320 aa11.02□□□□□ -0.65
SHKBP1-218ENST00000598907 LINC00854A0A1B0GVQ3 168 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 CENPXA8MT69 81 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 J3QR06 171 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 SLC31A2O15432 143 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 PPYP01298 95 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 IFNA6P05013 189 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 AADACP22760 399 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 TSPAN5P62079 268 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 BLCAPP62952 87 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 TMEM17Q86X19 198 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 OR51S1Q8NGJ8 323 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 OR13C8Q8NGS7 320 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 OR13D1Q8NGV5 346 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 OR9G1Q8NH87 305 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 TERB2Q8NHR7 220 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 EDARADDQ8WWZ3 215 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 MOB3AQ96BX8 217 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 PRRT1Q99946 306 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 CLEC7AQ9BXN2 247 aa11.01□□□□□ -0.65
SHKBP1-218ENST00000598907 IGKV1D-13A0A0B4J2D9 117 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 FAM172BPA6NC97 362 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 OR5H14A6NHG9 310 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 ODF3BA8MYP8 253 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 IGHV3-7P01780 117 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 IGKV1-13P0DP09 117 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 COX7A1P24310 79 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 SLC6A1P30531 599 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 UCP3P55916 312 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 ZNF626Q68DY1 528 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 C10orf99Q6UWK7 81 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms