RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 TIMM50Q3ZCQ8 353 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 IDNKQ5T6J7 187 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 HACD4Q5VWC8 232 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 Q6ZS49 121 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 TCTEX1D1Q8N7M0 179 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 OR5M8Q8NGP6 311 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 CLCC1Q96S66 551 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 ST6GALNAC5Q9BVH7 336 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 TOLLIPQ9H0E2 274 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.43□□□□□ -0.58
XRCC1-208ENST00000598422 SDHAF2Q9NX18 166 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 RHBDL2Q9NX52 303 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 FOXA2Q9Y261 457 aaPredicted RBP11.43□□□□□ -0.58
XRCC1-208ENST00000598422 VSIG4Q9Y279 399 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 ETV7Q9Y603 341 aa11.43□□□□□ -0.58
XRCC1-208ENST00000598422 SLC25A17O43808 307 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 PROP1O75360 226 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 CA2P00918 260 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 CTXN2P0C2S0 81 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 CLEC2LP0C7M8 214 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 CD40LGP29965 261 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 SCAND1P57086 179 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 LINC00205P59089 165 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 PSG5Q15238 335 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 NUDCD2Q8WVJ2 157 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 UBE2E2Q96LR5 201 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 HARBI1Q96MB7 349 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 DCSTAMPQ9H295 470 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 KLK15Q9H2R5 256 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 RNF167Q9H6Y7 350 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 ZMAT5Q9UDW3 170 aaKnown RBP11.42□□□□□ -0.58
XRCC1-208ENST00000598422 ELF5Q9UKW6 265 aaPredicted RBP11.42□□□□□ -0.58
XRCC1-208ENST00000598422 PLXNB1O43157 2135 aa11.42□□□□□ -0.58
XRCC1-208ENST00000598422 PRKDCP78527 4128 aaKnown RBP11.42□□□□□ -0.58
XRCC1-208ENST00000598422 FCN1O00602 326 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 TAGLNQ01995 201 aaKnown RBP11.41□□□□□ -0.58
XRCC1-208ENST00000598422 PPP1R27Q86WC6 154 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 H1FOOQ8IZA3 346 aaPredicted RBP11.41□□□□□ -0.58
XRCC1-208ENST00000598422 TSPAN14Q8NG11 270 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 GRPEL2Q8TAA5 225 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 MYOZ3Q8TDC0 251 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 ARPC1AQ92747 370 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 ADTRPQ96IZ2 230 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 OR5B12Q96R08 314 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 GNB4Q9HAV0 340 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 GAB2Q9UQC2 676 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 FBXO7Q9Y3I1 522 aa11.41□□□□□ -0.58
XRCC1-208ENST00000598422 IGKV1D-8A0A087WSZ0 117 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 A0A087WXM4 84 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 SHOXO15266 292 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 TNFAIP8O95379 198 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 CNIH1O95406 144 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 IGLV1-40P01703 118 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 OR8U8P0C7N1 319 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 RRASP10301 218 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 LGALS7P47929 136 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 RAB9AP51151 201 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 GNB1P62873 340 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 ACTBL2Q562R1 376 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 PYHIN1Q6K0P9 492 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 UNQ5815/PRO19632Q6UWF5 114 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 ZNF562Q6V9R5 426 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 MINDY2Q8NBR6 621 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 OR11H1Q8NG94 326 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 FAM103A1Q9BTL3 118 aaKnown RBP11.4□□□□□ -0.58
XRCC1-208ENST00000598422 TPSG1Q9NRR2 321 aa11.4□□□□□ -0.58
XRCC1-208ENST00000598422 TRAV18A0A075B6X5 111 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 A0A0A6YYH2 397 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 A6NJ64 397 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 J3QRK9 145 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 AIREO43918 545 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 LUMP51884 338 aaPredicted RBP11.39□□□□□ -0.59
XRCC1-208ENST00000598422 CRIP2P52943 208 aaPredicted RBP11.39□□□□□ -0.59
XRCC1-208ENST00000598422 KRTAP10-11P60412 298 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 ZNF616Q08AN1 781 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 EGFEM1PQ0D2K5 195 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 FXYD3Q14802 87 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 ZNF260Q3ZCT1 412 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 C9orf66Q5T8R8 295 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 ZNF491Q8N8L2 437 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 BVESQ8NE79 360 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 OR1N2Q8NGR9 330 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 DIABLOQ9NR28 239 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 OR2W1Q9Y3N9 320 aa11.39□□□□□ -0.59
XRCC1-208ENST00000598422 SEC14L6B5MCN3 397 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 TMEM127O75204 238 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 NFYAP23511 347 aaPredicted RBP11.38□□□□□ -0.59
XRCC1-208ENST00000598422 TPPP2P59282 170 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 ARPC4P59998 168 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 FHL3Q13643 280 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 VMA21Q3ZAQ7 101 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 C19orf54Q5BKX5 351 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 CNIH2Q6PI25 160 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 CROCCP3Q8IVE0 287 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 ZNF645Q8N7E2 425 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 LFNGQ8NES3 379 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 OR5H6Q8NGV6 325 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 CASTOR1Q8WTX7 329 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 SLC25A38Q96DW6 304 aa11.38□□□□□ -0.59
XRCC1-208ENST00000598422 C5orf30Q96GV9 206 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms