RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	RNF5	Q99942	180 aa		8.07	□□□□□ -1.12
LSM4-205	ENST00000597776	PECR	Q9BY49	303 aa		8.07	□□□□□ -1.12
LSM4-205	ENST00000597776	SLA2	Q9H6Q3	261 aa		8.07	□□□□□ -1.12
LSM4-205	ENST00000597776	ZMAT4	Q9H898	229 aa		8.07	□□□□□ -1.12
LSM4-205	ENST00000597776	ZNF355P	Q9NSJ1	428 aa		8.07	□□□□□ -1.12
LSM4-205	ENST00000597776	RDH8	Q9NYR8	311 aa		8.07	□□□□□ -1.12
LSM4-205	ENST00000597776	STARD9	Q9P2P6	4700 aa		8.07	□□□□□ -1.12
LSM4-205	ENST00000597776	C13orf42	A0A1B0GVH6	325 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	CASQ2	O14958	399 aa	Predicted RBP	8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	CNIH1	O95406	144 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	IGLV1-51	P01701	117 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	HSMCR30	P0CW71	290 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	PLA2G7	Q13093	441 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	IRF3	Q14653	427 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	PLAC9	Q5JTB6	97 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	ZFAND6	Q6FIF0	208 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	ANKRD13B	Q86YJ7	626 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	PDPN	Q86YL7	162 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	UFD1	Q92890	307 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	CMSS1	Q9BQ75	279 aa	Known RBP	8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	TM2D3	Q9BRN9	247 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	ELOVL1	Q9BW60	279 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	PALMD	Q9NP74	551 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	SLC35D1	Q9NTN3	355 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	ADAM30	Q9UKF2	790 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	HSF4	Q9ULV5	492 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	MGAT4A	Q9UM21	535 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	STUB1	Q9UNE7	303 aa		8.06	□□□□□ -1.12
LSM4-205	ENST00000597776	CSMD3	Q7Z407	3707 aa		8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	TRDC	B7Z8K6	153 aa		8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	IGLV2-23	P01705	113 aa		8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	TRBV12-3	P01733	135 aa		8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	APELA	P0DMC3	54 aa		8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	IGSF11	Q5DX21	431 aa		8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	C5orf30	Q96GV9	206 aa		8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	CITED4	Q96RK1	184 aa		8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	OR2D2	Q9H210	308 aa		8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	RANGRF	Q9HD47	186 aa	Predicted RBP	8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	C19orf73	Q9NVV2	129 aa		8.05	□□□□□ -1.12
LSM4-205	ENST00000597776	LYST	Q99698	3801 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	BET1	O15155	118 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	LDLRAD4	O15165	306 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	FABP7	O15540	132 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	RBMXL2	O75526	392 aa	Known RBP	8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	CRYGB	P07316	175 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	ZP3	P21754	424 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	CALR	P27797	417 aa	Known RBP	8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	SYNJ2BP	P57105	145 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	FABP5	Q01469	135 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	TPBG	Q13641	420 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	KLF5	Q13887	457 aa	Predicted RBP	8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	C2orf76	Q3KRA6	126 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	MOGAT2	Q3SYC2	334 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	HES5	Q5TA89	166 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	IL34	Q6ZMJ4	242 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	OR56B1	Q8NGI3	324 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	OR4A4P	Q8NGN8	299 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	OR9G4	Q8NGQ1	327 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	MAFIP	Q8WZ33	124 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	FAM3D	Q96BQ1	224 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	HARBI1	Q96MB7	349 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	VCX	Q9H320	206 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	SDHAF2	Q9NX18	166 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	SCN3B	Q9NY72	215 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	KCNK7	Q9Y2U2	307 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776	DNAH1	Q9P2D7	4330 aa		8.04	□□□□□ -1.12
LSM4-205	ENST00000597776		A0A0G2JLM5	398 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	LCE6A	A0A183	80 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	TMEM272	A0A1B0GTI8	110 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	SRRM4	A7MD48	611 aa	Known RBP	8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	ANKRD65	E5RJM6	399 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776		H3BUA1	57 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	DENR	O43583	198 aa	Known RBP	8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	ARL6IP5	O75915	188 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	FCGR3A	P08637	254 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	DYRK1A	Q13627	763 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	MRGPRG-AS1	Q2M3A8	158 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	SGPP2	Q8IWX5	399 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	BVES	Q8NE79	360 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	CABLES2	Q9BTV7	478 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	TINAGL1	Q9GZM7	467 aa	Predicted RBP	8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	EDA2R	Q9HAV5	297 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	COA4	Q9NYJ1	87 aa		8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	NKX1-2	Q9UD57	310 aa	Predicted RBP	8.03	□□□□□ -1.12
LSM4-205	ENST00000597776	ZNF230	Q9UIE0	474 aa	Predicted RBP	8.03	□□□□□ -1.12
LSM4-205	ENST00000597776		A0A075B6Q4	140 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	IZUMO1R	A6ND01	250 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776		A8MZ25	164 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	SHOX	O15266	292 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	RGS10	O43665	173 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	GSTT2	P0CG29	244 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	GSTT2B	P0CG30	244 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	GNB3	P16520	340 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	MAP2K4	P45985	399 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	LGALS7	P47929	136 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	SERPINB10	P48595	397 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	AQP4	P55087	323 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	OR10A3	P58181	314 aa		8.02	□□□□□ -1.13
LSM4-205	ENST00000597776	MRPS15	P82914	257 aa	Known RBP	8.02	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms