RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 GRIFINA4D1Z8 144 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 NDUFB4O95168 129 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 DEFA4P12838 97 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 TNFSF10P50591 281 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 SELENOTP62341 195 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 OR1L1Q8NH94 360 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 OR5P3Q8WZ94 311 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 CLN8Q9UBY8 286 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 TP53TG3Q9ULZ0 132 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 AHCTF1Q8WYP5 2266 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 C3orf80F5H4A9 247 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 CCL2P13500 99 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 SELEP16581 610 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 RANP62826 216 aaKnown RBP13.08□□□□□ -0.32
IRF3-219ENST00000597636 C21orf62-AS1Q17RA5 79 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 TMEM183BQ1AE95 376 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 FAM58AQ8N1B3 248 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 DRAM1Q8N682 238 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 ZNF114Q8NC26 417 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 SFRP2Q96HF1 295 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 DERL1Q9BUN8 251 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 OR2J1Q9GZK6 312 aa13.08□□□□□ -0.32
IRF3-219ENST00000597636 LOC102723996A0A087X1L8 192 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 CDC34P49427 236 aaPredicted RBP13.07□□□□□ -0.32
IRF3-219ENST00000597636 ZDHHC11Q9H8X9 412 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 PAM16Q9Y3D7 125 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 M0R296 226 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 RBFOX2O43251 390 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■□□□□ 9.8
IRF3-219ENST00000597636 IGHV3-9P01782 118 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 ESDP10768 282 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 ATP5G3P48201 142 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 LINC00310P59036 64 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 KCNE4Q8WWG9 221 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 IMMP1LQ96LU5 166 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
IRF3-219ENST00000597636 PILRBQ9UKJ0 227 aa13.07□□□□□ -0.32
IRF3-219ENST00000597636 IGHV1-45A0A0A0MS14 117 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 C5orf49A4QMS7 147 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 PGPEP1LA6NFU8 196 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 SYNGR4O95473 234 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 SERPINA7P05543 415 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 CYC1P08574 325 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 SPINK2P20155 84 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 MSMO1Q15800 293 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 HSPB9Q9BQS6 159 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 PATZ1Q9HBE1 687 aaKnown RBP13.06□□□□□ -0.32
IRF3-219ENST00000597636 ZFHX2Q9C0A1 2572 aaPredicted RBP13.06□□□□□ -0.32
IRF3-219ENST00000597636 UMODP07911 640 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 IL6RP08887 468 aaPredicted RBP13.06□□□□□ -0.32
IRF3-219ENST00000597636 UBE2G2P60604 165 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 VWC2Q2TAL6 325 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 OR10D3Q8NH80 312 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 UBALD1Q8TB05 177 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 VAMP8Q9BV40 100 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 PCED1AQ9H1Q7 454 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 KCNIP2Q9NS61 270 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 URB1O60287 2271 aaKnown RBP13.06□□□□□ -0.32
IRF3-219ENST00000597636 RNF212BA8MTL3 300 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 KRASP01116 189 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 SRD5A2P31213 254 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 PCP4P48539 62 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 LHX2P50458 406 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 DMRTA1Q5VZB9 504 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 MOB1BQ7L9L4 216 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 R4GN57 208 aa13.06□□□□□ -0.32
IRF3-219ENST00000597636 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 LRRC30A6NM36 301 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 C17orf112F2Z3M2 114 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 KITLGP21583 273 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 BMP5P22003 454 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 CDKN1AP38936 164 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 RPS16P62249 146 aaKnown RBP13.05□□□□□ -0.32
IRF3-219ENST00000597636 OR5I1Q13606 314 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 BATFQ16520 125 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 NRN1LQ496H8 165 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 APOBEC3DQ96AK3 386 aaPredicted RBP13.05□□□□□ -0.32
IRF3-219ENST00000597636 OPN3Q9H1Y3 402 aaPredicted RBP13.05□□□□□ -0.32
IRF3-219ENST00000597636 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.05□□□□□ -0.32
IRF3-219ENST00000597636 LOC400499M0QZD8 3231 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 LAMA5O15230 3695 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 F6UZH7 168 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 RAMP3O60896 148 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 SERF1AO75920 110 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 P0C879 139 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 G6PCP35575 357 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 TMEM249Q2WGJ8 235 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 RPS19BP1Q86WX3 136 aaKnown RBP13.05□□□□□ -0.32
IRF3-219ENST00000597636 VN1R17PQ8TDU5 208 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 ABHD3Q8WU67 409 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 PRRG4Q9BZD6 226 aa13.05□□□□□ -0.32
IRF3-219ENST00000597636 TRBV20OR9-2A0A075B6H5 130 aa13.04□□□□□ -0.32
IRF3-219ENST00000597636 IGHV5-10-1A0A0J9YXX1 117 aa13.04□□□□□ -0.32
IRF3-219ENST00000597636 A0A1W2PQM1 296 aa13.04□□□□□ -0.32
IRF3-219ENST00000597636 ODAMA1E959 279 aa13.04□□□□□ -0.32
IRF3-219ENST00000597636 ZG16O60844 167 aa13.04□□□□□ -0.32
IRF3-219ENST00000597636 CRISP2P16562 243 aa13.04□□□□□ -0.32
IRF3-219ENST00000597636 ARF1P84077 181 aaKnown RBP13.04□□□□□ -0.32
IRF3-219ENST00000597636 Q6P435 159 aa13.04□□□□□ -0.32
IRF3-219ENST00000597636 DTD1Q8TEA8 209 aa13.04□□□□□ -0.32
IRF3-219ENST00000597636 TRAPPC2LQ9UL33 140 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms