RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 OR2K2Q8NGT1 345 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 SETD6Q8TBK2 473 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 THRSPQ92748 146 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 GGHQ92820 318 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 TMEM68Q96MH6 324 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 RIMS4Q9H426 269 aaPredicted RBP7.54□□□□□ -1.2
LIG1-209ENST00000596104 KCNK15Q9H427 330 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 CHMP1AQ9HD42 196 aaPredicted RBP7.54□□□□□ -1.2
LIG1-209ENST00000596104 SMPD3Q9NY59 655 aaPredicted RBP7.54□□□□□ -1.2
LIG1-209ENST00000596104 ALMS1Q8TCU4 4167 aa7.54□□□□□ -1.2
LIG1-209ENST00000596104 IGKV1-6A0A0C4DH72 117 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 EFCAB10A6NFE3 127 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 ZNF785A8K8V0 405 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 CNIH1O95406 144 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 APOA2P02652 100 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 CD7P09564 240 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 CD37P11049 281 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 MAPK3P27361 379 aaPredicted RBP7.53□□□□□ -1.2
LIG1-209ENST00000596104 CD81P60033 236 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 ST3GAL4Q11206 333 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 TATDN3Q17R31 274 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 RPEL1Q2QD12 228 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 LAX1Q8IWV1 398 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 ADAD2Q8NCV1 583 aaKnown RBP7.53□□□□□ -1.2
LIG1-209ENST00000596104 ZNF555Q8NEP9 628 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 KCNG3Q8TAE7 436 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 USMG5Q96IX5 58 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 NEURL2Q9BR09 285 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 LPAR5Q9H1C0 372 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 WFDC10AQ9H1F0 79 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 S100A14Q9HCY8 104 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 SLC35D1Q9NTN3 355 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 AK3Q9UIJ7 227 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 ZNF221Q9UK13 617 aa7.53□□□□□ -1.2
LIG1-209ENST00000596104 SRRM4A7MD48 611 aaKnown RBP7.52□□□□□ -1.21
LIG1-209ENST00000596104 FOXI3A8MTJ6 420 aaPredicted RBP7.52□□□□□ -1.21
LIG1-209ENST00000596104 M0R1X1 148 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 BMPR1BO00238 502 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 SOCS1O15524 211 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 TPPPO94811 219 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 LGALS7P47929 136 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 CD300EQ496F6 205 aaPredicted RBP7.52□□□□□ -1.21
LIG1-209ENST00000596104 ACSM3Q53FZ2 586 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 RNLSQ5VYX0 342 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 LAIR2Q6ISS4 152 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 FAM89BQ8N5H3 189 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 DEFB125Q8N687 156 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.52□□□□□ -1.21
LIG1-209ENST00000596104 LINC00476Q8WZB0 136 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 SNAPC3Q92966 411 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 Q9N2K0 584 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 PLEKHJ1Q9NW61 149 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 COA4Q9NYJ1 87 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 PEMTQ9UBM1 199 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 MGAT4AQ9UM21 535 aa7.52□□□□□ -1.21
LIG1-209ENST00000596104 AIREO43918 545 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 BPNT1O95861 308 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 SRMP19623 302 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 TMEM50BP56557 158 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 WNT4P56705 351 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 DEFB114Q30KQ6 69 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 TMEM177Q53S58 311 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 GLT8D1Q68CQ7 371 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 PHYHIPQ92561 330 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 C5orf30Q96GV9 206 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 HARBI1Q96MB7 349 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 SRD5A3Q9H8P0 318 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 C12orf4Q9NQ89 552 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 ZC4H2Q9NQZ6 224 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 SLC2A8Q9NY64 477 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 RDH8Q9NYR8 311 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 ZNF230Q9UIE0 474 aaPredicted RBP7.51□□□□□ -1.21
LIG1-209ENST00000596104 HSF4Q9ULV5 492 aa7.51□□□□□ -1.21
LIG1-209ENST00000596104 TRBV9A0A0B4J1U6 114 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 A0A0B4J203 849 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 MSGN1A6NI15 193 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 OR11H12B2RN74 326 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 MYL12BO14950 172 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 OR9G9P0C7N8 305 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 APELAP0DMC3 54 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 EDN2P20800 178 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 RHOGP84095 191 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 ZNF45Q02386 682 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 EXOSC2Q13868 293 aaKnown RBP7.5□□□□□ -1.21
LIG1-209ENST00000596104 RBM48Q5RL73 367 aaKnown RBP7.5□□□□□ -1.21
LIG1-209ENST00000596104 TTC23Q5W5X9 447 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 C10orf67Q8IYJ2 551 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 NANOGP1Q8N7R0 232 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 OR6M1Q8NGM8 313 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 AKIP1Q9NQ31 210 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 SDHAF2Q9NX18 166 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 PSORS1C1Q9UIG5 152 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 DMRT1Q9Y5R6 373 aa7.5□□□□□ -1.21
LIG1-209ENST00000596104 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.49□□□□□ -1.21
LIG1-209ENST00000596104 C2orf70A6NJV1 201 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 FAM223BA6NKX1 122 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 TRDCB7Z8K6 153 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 SHOXO15266 292 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 PRH1P02810 166 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 CD3GP09693 182 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms