RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 DMRTA1Q5VZB9 504 aa14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 MBD3L2Q8NHZ7 208 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 MSI2Q96DH6 328 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 FAM215AQ9Y5M1 114 aa14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 IGSF23A1L1A6 192 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 FAM24AA6NFZ4 105 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 IQCF6A8MYZ5 107 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 DEGS1O15121 323 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 CDS2O95674 445 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 RPL29P47914 159 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 P2RY6Q15077 328 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 BHLHA15Q7RTS1 189 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 LINC00596Q86U02 117 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 ABHD14BQ96IU4 210 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 LPAR2Q9HBW0 351 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 SIRPB1O00241 398 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 BCL2P10415 239 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 ASCL1P50553 236 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 CENPVQ7Z7K6 275 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 GBGT1Q8N5D6 347 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 NAGKQ9UJ70 344 aa14.37□□□□□ -0.11
SHKBP1-205ENST00000594973 A6NNC1 897 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 ATXN7O15265 892 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 SCGB1D1O95968 90 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 BRS3P32247 399 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 HOXA4Q00056 320 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 BAXQ07812 192 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 NCR3LG1Q68D85 454 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 MRPL30Q8TCC3 161 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 TMEM171Q8WVE6 324 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 LYRM2Q9NU23 88 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 LAMP3Q9UQV4 416 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 POLDIP2Q9Y2S7 368 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 TRAV39A0A0B4J263 110 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 IGHV1-18A0A0C4DH31 117 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 NXPH2O95156 264 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 VAMP2P63027 116 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 SPIN3Q5JUX0 258 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 ZNF705AQ6ZN79 300 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 C20orf144Q9BQM9 153 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 GNG13Q9P2W3 67 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 ATP23Q9Y6H3 246 aa14.36□□□□□ -0.11
SHKBP1-205ENST00000594973 IGKV1-6A0A0C4DH72 117 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 KIR2DS1A0A191URI9 304 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 PHF1O43189 567 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 MLNRO43193 412 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 TIMM8AO60220 97 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 HPRT1P00492 218 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 KIR2DS4P43632 304 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 ELLP55199 621 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 KIR2DS1Q14954 304 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 ACTL10Q5JWF8 245 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 Q6ZS49 121 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 TMEM252Q8N6L7 170 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 OR51G1Q8NGK1 321 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 ABHD17AQ96GS6 310 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 GPHA2Q96T91 129 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 MIEN1Q9BRT3 115 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 AGMATQ9BSE5 352 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 MSL2Q9HCI7 577 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 IGHV2OR16-5A0A0B4J2B6 119 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 OR2H2O95918 312 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 GNRHRP30968 328 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 UCP3P55916 312 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 TAS2R30P59541 319 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 TMEM241Q24JQ0 296 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 Q6P435 159 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 ZNF826PQ6ZT77 177 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 DIRC2Q96SL1 478 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 IMMP2LQ96T52 175 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 GAL3ST2Q9H3Q3 398 aa14.35□□□□□ -0.11
SHKBP1-205ENST00000594973 SMG1Q96Q15 3661 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-205ENST00000594973 IL6RP08887 468 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-205ENST00000594973 IRF2P14316 349 aa14.34□□□□□ -0.11
SHKBP1-205ENST00000594973 MMP9P14780 707 aa14.34□□□□□ -0.11
SHKBP1-205ENST00000594973 C1orf185Q5T7R7 199 aa14.34□□□□□ -0.11
SHKBP1-205ENST00000594973 ZNF474Q6S9Z5 364 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-205ENST00000594973 MEX3BQ6ZN04 569 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-205ENST00000594973 OR5C1Q8NGR4 320 aa14.34□□□□□ -0.11
SHKBP1-205ENST00000594973 OR5B12Q96R08 314 aa14.34□□□□□ -0.11
SHKBP1-205ENST00000594973 NAT8Q9UHE5 227 aa14.34□□□□□ -0.11
SHKBP1-205ENST00000594973 IGKV1D-13A0A0B4J2D9 117 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 ITGB1BP1O14713 200 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 IGLV1-44P01699 117 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 IGKV1-13P0DP09 117 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 ZNF83P51522 516 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 ERVK11-1P61568 191 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 RANP62826 216 aaKnown RBP14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 SRPXP78539 464 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 SRSF7Q16629 238 aaKnown RBP eCLIP14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 C16orf82Q7Z2V1 217 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 Q8IYB0 196 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 CCDC71LQ8N9Z2 235 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 IL1F10Q8WWZ1 152 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 TP53RKQ96S44 253 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 ZFP30Q9Y2G7 519 aa14.33□□□□□ -0.11
SHKBP1-205ENST00000594973 PROB1E7EW31 1015 aa14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 TYMSP04818 313 aa14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 GCH1P30793 250 aa14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 NKX2-1P43699 371 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms