RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 SAP30LQ9HAJ7 183 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 LCN12Q6JVE5 192 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 CLEC1BQ9P126 229 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 IGHV2-70DA0A0C4DH43 119 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 G3V3Y1 287 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 SH2D1BO14796 132 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 GPX1P07203 203 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 PLP2Q04941 152 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 FOXL1Q12952 345 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 SPINK9Q5DT21 86 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 ST8SIA1Q92185 356 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 HELZP42694 1942 aaKnown RBP10.57□□□□□ -0.72
LIG1-207ENST00000594759 FANCMQ8IYD8 2048 aa10.57□□□□□ -0.72
LIG1-207ENST00000594759 SNRNP200O75643 2136 aaKnown RBP10.57□□□□□ -0.72
LIG1-207ENST00000594759 FRG2CA6NGY1 282 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 C17orf51A8MQB3 221 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 K7EQM0 130 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 LEPROTL1O95214 131 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 OR5AL1P0C617 328 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 C3orf79P0CE67 100 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 OR8B8Q15620 311 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 LRTM2Q8N967 370 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 HSPB8Q9UJY1 196 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 C7orf71A4D174 169 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 OR5B21A6NL26 309 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 H3BUT2 72 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 SCRG1O75711 98 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 CLDN15P56746 228 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 FHL1Q13642 323 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 TRAT1Q6PIZ9 186 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 FA2HQ7L5A8 372 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 DEFB123Q8N688 67 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 OR1L3Q8NH93 324 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 TXNDC17Q9BRA2 123 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 DIDO1Q9BTC0 2240 aaKnown RBP10.56□□□□□ -0.72
LIG1-207ENST00000594759 OR2T8A6NH00 312 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 CSN3P07498 182 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 ACSM6Q6P461 480 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 ZNF519Q8TB69 540 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.56□□□□□ -0.72
LIG1-207ENST00000594759 VWCEQ96DN2 955 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 GNB4Q9HAV0 340 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 PILRAQ9UKJ1 303 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 SNAI2O43623 268 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 CSRP1P21291 193 aaKnown RBP10.56□□□□□ -0.72
LIG1-207ENST00000594759 OR1N2Q8NGR9 330 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 GATAD1Q8WUU5 269 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 FBXL7Q9UJT9 491 aa10.56□□□□□ -0.72
LIG1-207ENST00000594759 TRAV38-1A0A0B4J264 116 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 NAPSAO96009 420 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 ESDP10768 282 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 IL11P20809 199 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 ID3Q02535 119 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 FXYD3Q14802 87 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 ACSF3Q4G176 576 aaPredicted RBP10.55□□□□□ -0.72
LIG1-207ENST00000594759 AGMATQ9BSE5 352 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 OR2D2Q9H210 308 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 ELOVL5Q9NYP7 299 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 OR51B2Q9Y5P1 312 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 SHANK1Q9Y566 2161 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 ALG1L2C9J202 215 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 H0Y980 276 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 PPBPP02775 128 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 NPBWR2P48146 333 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 PDLIM4P50479 330 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 CKS1BP61024 79 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 RHOBP62745 196 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 PRAMEF5Q5TYX0 476 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 PRAMEF6Q5VXH4 476 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 ZNF525Q8N782 197 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 ZNF611Q8N823 705 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 Q96M66 194 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 WDR54Q9H977 334 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 JKAMPQ9P055 326 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 SPCS1Q9Y6A9 102 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 CXorf1O96002 111 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 ARL3P36405 182 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 SHISA5Q8N114 240 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 OR2K2Q8NGT1 345 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 OR4S2Q8NH73 311 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 CTHRC1Q96CG8 243 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 YPEL4Q96NS1 127 aa10.55□□□□□ -0.72
LIG1-207ENST00000594759 TMEM265A0A087WTH1 108 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 TYMSP04818 313 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 ATP5G3P48201 142 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 TAS2R45P59539 299 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 ZNF818PQ6ZRF7 136 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 BDP1A6H8Y1 2624 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 ANKRD30BLA7E2S9 258 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 TCTAP57738 103 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 FOXF1Q12946 379 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 LRRC10Q5BKY1 277 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 ZNF841Q6ZN19 808 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 RNF144BQ7Z419 303 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 OXGR1Q96P68 337 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 SPTAN1Q13813 2472 aaKnown RBP10.54□□□□□ -0.72
LIG1-207ENST00000594759 CAPZBP47756 277 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 CCR5P51681 352 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 ASPHD2Q6ICH7 369 aa10.54□□□□□ -0.72
LIG1-207ENST00000594759 C9orf40Q8IXQ3 194 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms