RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 GNRHRP30968 328 aa16.71■□□□□ 0.27
CIRBP-229ENST00000590704 ACTBP60709 375 aa16.71■□□□□ 0.27
CIRBP-229ENST00000590704 HES1Q14469 280 aa16.71■□□□□ 0.27
CIRBP-229ENST00000590704 VAX1Q5SQQ9 334 aa16.71■□□□□ 0.27
CIRBP-229ENST00000590704 FAM71E2Q8N5Q1 922 aa16.71■□□□□ 0.27
CIRBP-229ENST00000590704 OR5H2Q8NGV7 314 aa16.71■□□□□ 0.27
CIRBP-229ENST00000590704 LINC01548A6NM66 108 aa16.7■□□□□ 0.26
CIRBP-229ENST00000590704 TAS2R46P59540 309 aa16.7■□□□□ 0.26
CIRBP-229ENST00000590704 MRPS10P82664 201 aaKnown RBP16.7■□□□□ 0.26
CIRBP-229ENST00000590704 AADACL3Q5VUY0 350 aa16.7■□□□□ 0.26
CIRBP-229ENST00000590704 TMEM229BQ8NBD8 167 aa16.7■□□□□ 0.26
CIRBP-229ENST00000590704 OR4F5Q8NH21 305 aa16.7■□□□□ 0.26
CIRBP-229ENST00000590704 MOB3AQ96BX8 217 aa16.7■□□□□ 0.26
CIRBP-229ENST00000590704 SDHCQ99643 169 aaPredicted RBP16.7■□□□□ 0.26
CIRBP-229ENST00000590704 NPFFR1Q9GZQ6 430 aa16.7■□□□□ 0.26
CIRBP-229ENST00000590704 MOB4Q9Y3A3 225 aa16.7■□□□□ 0.26
CIRBP-229ENST00000590704 OR5H14A6NHG9 310 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 FGF16O43320 207 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 SRSF4Q08170 494 aaKnown RBP16.69■□□□□ 0.26
CIRBP-229ENST00000590704 CNPY1Q3B7I2 92 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 TMEM95Q3KNT9 176 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 ABCA11PQ4W5N1 156 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 LHFPL1Q86WI0 220 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 NPBQ8NG41 125 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 MRGPRFQ96AM1 343 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 ZNF2Q9BSG1 426 aaPredicted RBP16.69■□□□□ 0.26
CIRBP-229ENST00000590704 FXYD6Q9H0Q3 95 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 RABL2AQ9UBK7 228 aaPredicted RBP16.69■□□□□ 0.26
CIRBP-229ENST00000590704 RABL2BQ9UNT1 228 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 TRRAPQ9Y4A5 3859 aa16.69■□□□□ 0.26
CIRBP-229ENST00000590704 SRRM4A7MD48 611 aaKnown RBP16.68■□□□□ 0.26
CIRBP-229ENST00000590704 NDUFA3O95167 84 aa16.68■□□□□ 0.26
CIRBP-229ENST00000590704 MC5RP33032 325 aa16.68■□□□□ 0.26
CIRBP-229ENST00000590704 SSBP1Q04837 148 aaKnown RBP16.68■□□□□ 0.26
CIRBP-229ENST00000590704 MSMO1Q15800 293 aa16.68■□□□□ 0.26
CIRBP-229ENST00000590704 ZNF818PQ6ZRF7 136 aa16.68■□□□□ 0.26
CIRBP-229ENST00000590704 SECTM1Q8WVN6 248 aa16.68■□□□□ 0.26
CIRBP-229ENST00000590704 TRIM63Q969Q1 353 aa16.68■□□□□ 0.26
CIRBP-229ENST00000590704 WNT10AQ9GZT5 417 aa16.68■□□□□ 0.26
CIRBP-229ENST00000590704 ZNF107Q9UII5 783 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-229ENST00000590704 RBM7Q9Y580 266 aaKnown RBP16.68■□□□□ 0.26
CIRBP-229ENST00000590704 TNCP24821 2201 aa16.68■□□□□ 0.26
CIRBP-229ENST00000590704 IGLV2-23P01705 113 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 PRSS22Q9GZN4 317 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 BEX1Q9HBH7 125 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 WASHC3Q9Y3C0 194 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 RNF114Q9Y508 228 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 ANKRD20A5PA0PJZ0 165 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 FXYD4P59646 89 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 MRGPRG-AS1Q2M3A8 158 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 OR6F1Q8NGZ6 308 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 SRRQ9GZT4 340 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 SLC5A7Q9GZV3 580 aa16.67■□□□□ 0.26
CIRBP-229ENST00000590704 A0A1B0GUS0 222 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 SLC22A5O76082 557 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 CRYGBP07316 175 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 PTBP1P26599 531 aaKnown RBP eCLIP16.66■□□□□ 0.26
CIRBP-229ENST00000590704 THBS3P49746 956 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 FAAP20Q6NZ36 180 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 MFSD4AQ8N468 514 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 BVESQ8NE79 360 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 OR8H1Q8NGG4 311 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 OR4C13Q8NGP0 309 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 WFDC12Q8WWY7 111 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 HSPB9Q9BQS6 159 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 SLC35D1Q9NTN3 355 aa16.66■□□□□ 0.26
CIRBP-229ENST00000590704 M0QZK8 103 aa16.65■□□□□ 0.26
CIRBP-229ENST00000590704 IGHG2P01859 326 aa16.65■□□□□ 0.26
CIRBP-229ENST00000590704 S100A5P33763 92 aa16.65■□□□□ 0.26
CIRBP-229ENST00000590704 TMEM177Q53S58 311 aa16.65■□□□□ 0.26
CIRBP-229ENST00000590704 STEAP1BQ6NZ63 245 aa16.65■□□□□ 0.26
CIRBP-229ENST00000590704 PDPNQ86YL7 162 aa16.65■□□□□ 0.26
CIRBP-229ENST00000590704 AKR1E2Q96JD6 320 aa16.65■□□□□ 0.26
CIRBP-229ENST00000590704 RNF5Q99942 180 aa16.65■□□□□ 0.26
CIRBP-229ENST00000590704 THAP7Q9BT49 309 aaPredicted RBP16.65■□□□□ 0.26
CIRBP-229ENST00000590704 ZNF747Q9BV97 191 aa16.65■□□□□ 0.26
CIRBP-229ENST00000590704 LIN7CQ9NUP9 197 aaKnown RBP16.65■□□□□ 0.26
CIRBP-229ENST00000590704 FBN3Q75N90 2809 aa16.64■□□□□ 0.25
CIRBP-229ENST00000590704 NCBP2LA6PVI3 153 aaKnown RBP16.64■□□□□ 0.25
CIRBP-229ENST00000590704 FCN1O00602 326 aa16.64■□□□□ 0.25
CIRBP-229ENST00000590704 TBPP20226 339 aa16.64■□□□□ 0.25
CIRBP-229ENST00000590704 UCP3P55916 312 aa16.64■□□□□ 0.25
CIRBP-229ENST00000590704 TAS2R19P59542 299 aa16.64■□□□□ 0.25
CIRBP-229ENST00000590704 HIST2H2BDQ6DRA6 164 aa16.64■□□□□ 0.25
CIRBP-229ENST00000590704 C12orf54Q6X4T0 127 aa16.64■□□□□ 0.25
CIRBP-229ENST00000590704 TMEM17Q86X19 198 aa16.64■□□□□ 0.25
CIRBP-229ENST00000590704 BATF3Q9NR55 127 aa16.64■□□□□ 0.25
CIRBP-229ENST00000590704 NBR2O15453 112 aa16.63■□□□□ 0.25
CIRBP-229ENST00000590704 TNFSF12O43508 249 aa16.63■□□□□ 0.25
CIRBP-229ENST00000590704 SSBP2P81877 361 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-229ENST00000590704 KLF9Q13886 244 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-229ENST00000590704 PSG5Q15238 335 aa16.63■□□□□ 0.25
CIRBP-229ENST00000590704 MMDQ15546 238 aa16.63■□□□□ 0.25
CIRBP-229ENST00000590704 BAK1Q16611 211 aa16.63■□□□□ 0.25
CIRBP-229ENST00000590704 C5orf64Q2M2E5 130 aa16.63■□□□□ 0.25
CIRBP-229ENST00000590704 ACTBL2Q562R1 376 aa16.63■□□□□ 0.25
CIRBP-229ENST00000590704 ZBTB34Q8NCN2 500 aa16.63■□□□□ 0.25
CIRBP-229ENST00000590704 OR4C16Q8NGL9 310 aa16.63■□□□□ 0.25
CIRBP-229ENST00000590704 RSRP1Q9BUV0 290 aa16.63■□□□□ 0.25
CIRBP-229ENST00000590704 FBXL15Q9H469 300 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms