RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 C11orf54Q9H0W9 315 aaPredicted RBP9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 ABRACLQ9P1F3 81 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 OR1A1Q9P1Q5 309 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 EXOGQ9Y2C4 368 aaKnown RBP9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 ARL2BPQ9Y2Y0 163 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 S4R3C0 116 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 TCRBV3S1A0A5B6 114 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 ZNF320A2RRD8 509 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 TMEM213A2RRL7 107 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 M0R2N4 97 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 MPPED1O15442 326 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 GPX5O75715 221 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 TUSC2O75896 110 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 DCTN3O75935 186 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 OR2J3O76001 311 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 CD2P06729 351 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 OR9G9P0C7N8 305 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 MGMTP16455 207 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 GPR176Q14439 515 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 MRGPRG-AS1Q2M3A8 158 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 ANKRD55Q3KP44 614 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 XAF1Q6GPH4 301 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 C19orf35Q6ZS72 473 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 ZNF554Q86TJ5 538 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 PDPNQ86YL7 162 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 SYS1Q8N2H4 156 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 JAGN1Q8N5M9 183 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 OR1L6Q8NGR2 347 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 SETD6Q8TBK2 473 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 GPR148Q8TDV2 347 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 SULT4A1Q9BR01 284 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 ZNF446Q9NWS9 450 aa9.4□□□□□ -0.9
NEDD4L-227ENST00000590020 HERC1Q15751 4861 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 FAM223BA6NKX1 122 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 LGALS9O00182 355 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 UBE2CO00762 179 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 GGCTO75223 188 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 PDCD6O75340 191 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 S1PR2O95136 353 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 APOA2P02652 100 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 T-ENOLP0DO92 83 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 HOXB6P17509 224 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 GBX2P52951 348 aaPredicted RBP9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 TNXAQ16473 311 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 C15orf32Q32M92 178 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 SLC25A30Q5SVS4 291 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 AWAT2Q6E213 333 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 FAM223AQ8IWN6 122 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 Q96M66 194 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 FAAP24Q9BTP7 215 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 GABARAPL1Q9H0R8 117 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 SLC35D1Q9NTN3 355 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 GMPPBQ9Y5P6 360 aa9.39□□□□□ -0.91
NEDD4L-227ENST00000590020 TRAV8-7A0A075B6U6 113 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 TRBV9A0A0B4J1U6 114 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 SRRM4A7MD48 611 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 CEACAM6P40199 344 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 IDO2Q6ZQW0 420 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 RBPMS2Q6ZRY4 209 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 AMIGO2Q86SJ2 522 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 MRPL48Q96GC5 212 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 HARBI1Q96MB7 349 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 GABARAPL3Q9BY60 117 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 MFFQ9GZY8 342 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 IMPAD1Q9NX62 359 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 ERVK13-1Q9NX77 482 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 LRRC42Q9Y546 428 aa9.38□□□□□ -0.91
NEDD4L-227ENST00000590020 A0A1W2PPK0 400 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 M0R1X1 148 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 GLAP06280 429 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 IGFBP3P17936 291 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 ARL3P36405 182 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 MFAP2P55001 183 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 TAGLNQ01995 201 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 ATP6AP1Q15904 470 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 CLEC19AQ6UXS0 136 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 C6orf201Q7Z4U5 140 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 SVOPQ8N4V2 548 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 OR2C3Q8N628 320 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 OR5B3Q8NH48 314 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 SRSF12Q8WXF0 261 aaKnown RBP9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 RARRES2Q99969 163 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 CHMP1AQ9HD42 196 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 AMBNQ9NP70 447 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 FBXL7Q9UJT9 491 aa9.37□□□□□ -0.91
NEDD4L-227ENST00000590020 KIR2DL5BA0A0G2JN68 375 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 KIR2DL5BA0A0G2JPC4 375 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 FAM90A7PA6NKC0 464 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 SHOXO15266 292 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 CALB2P22676 271 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 ODF3L2Q3SX64 289 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 ZNF585BQ52M93 769 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 HSP90B2PQ58FF3 399 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 UNQ9165/PRO28630Q6UXU0 137 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 GPHB5Q86YW7 130 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 KIR2DL5AQ8N109 375 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 ZNF645Q8N7E2 425 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 MAPKAPK5-AS1Q8N8E1 139 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 NECAP1Q8NC96 275 aa9.36□□□□□ -0.91
NEDD4L-227ENST00000590020 KIR2DL5BQ8NHK3 375 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms