RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ADAM5Q6NVV9 412 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF826PQ6ZT77 177 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 C11orf53Q8IXP5 236 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 OR2Z1Q8NG97 314 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 UBALD1Q8TB05 177 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 MRGPRDQ8TDS7 321 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 TAF15Q92804 592 aaKnown RBP eCLIP6.19□□□□□ -1.42
ZNF540-206ENST00000589117 WDR61Q9GZS3 305 aaKnown RBP6.19□□□□□ -1.42
ZNF540-206ENST00000589117 RBKSQ9H477 322 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 RPRMQ9NS64 109 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 VAX2Q9UIW0 290 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 RAXQ9Y2V3 346 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 GPR179Q6PRD1 2367 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 SPAARA0A1B0GVQ0 90 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 A0A1W2PPH5 198 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF98A6NK75 572 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 PCNX2A6NKB5 2137 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 C17orf112F2Z3M2 114 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 WNT9BO14905 357 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 ARG1P05089 322 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 BCL2P10415 239 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 G6PCP35575 357 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 CFHR2P36980 270 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 CEBPDP49716 269 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF816Q0VGE8 651 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-206ENST00000589117 TIMM23BQ5SRD1 257 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 OR8G2PQ6IF36 304 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 C16orf54Q6UWD8 224 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 TMEM14EPQ6UXP3 125 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 ETV3LQ6ZN32 361 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 C1QL4Q86Z23 238 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 IQCF2Q8IXL9 164 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF808Q8N4W9 903 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-206ENST00000589117 CYB561D1Q8N8Q1 229 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 OR52L2PQ8NGH6 319 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 DTD1Q8TEA8 209 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 LRRC29Q8WV35 223 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 ISOC2Q96AB3 205 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 RAB39BQ96DA2 213 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 STARD4Q96DR4 205 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 OR4C12Q96R67 309 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 C12orf57Q99622 126 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 RSG1Q9BU20 258 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 TMEM147Q9BVK8 224 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 MSL2Q9HCI7 577 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 FAM186AA6NE01 2351 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 WDFY4Q6ZS81 3184 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 IGHV1-18A0A0C4DH31 117 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 LOC102723971A0A1B0GUV8 181 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 A0A1B0GWJ7 208 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 MBD3L4A6NDZ8 208 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-206ENST00000589117 MBD3L3A6NE82 208 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-206ENST00000589117 MBD3L5A6NJ08 208 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-206ENST00000589117 ZFP92A6NM28 416 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 FAM90A9PA6NNJ1 464 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 CEBPZOSA8MTT3 80 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 MGST3O14880 152 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 PPIHO43447 177 aaKnown RBP6.18□□□□□ -1.42
ZNF540-206ENST00000589117 TGOLN2O43493 480 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 CEACAM4O75871 244 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 CRYABP02511 175 aaKnown RBP6.18□□□□□ -1.42
ZNF540-206ENST00000589117 DAOP14920 347 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 GPR12P47775 334 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 ERVK-16P61578 105 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 RPS23P62266 143 aaKnown RBP6.18□□□□□ -1.42
ZNF540-206ENST00000589117 SNRPEP62304 92 aaKnown RBP6.18□□□□□ -1.42
ZNF540-206ENST00000589117 RAB11AP62491 216 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 DLK1P80370 383 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 HABP2Q14520 560 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-206ENST00000589117 PRAMEF6Q5VXH4 476 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 LCN15Q6UWW0 184 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 MBD3L2Q8NHZ7 208 aaPredicted RBP6.18□□□□□ -1.42
ZNF540-206ENST00000589117 COQ2Q96H96 371 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 SNX22Q96L94 193 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 TMEM242Q9NWH2 141 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 GNG12Q9UBI6 72 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 JPT1Q9UK76 154 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 MUC3AQ02505 3323 aa6.18□□□□□ -1.42
ZNF540-206ENST00000589117 UBE2L5PA0A1B0GUS4 154 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 C5orf52A6NGY3 159 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 RAMP3O60896 148 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 TNFSF13O75888 250 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 PTBP3O95758 552 aaKnown RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 GLIPR1P48060 266 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 PSMB3P49720 205 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 KLF3P57682 345 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 S100A12P80511 92 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 FOXF2Q12947 444 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 SP5Q6BEB4 398 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 IGFL3Q6UXB1 125 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 Q6ZR03 302 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 CENPVQ7Z7K6 275 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 LHX4Q969G2 390 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF251Q9BRH9 671 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 MRPL37Q9BZE1 423 aaKnown RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 OR6C3Q9NZP0 311 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 METTL1Q9UBP6 276 aaKnown RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 PSG11Q9UQ72 335 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 RFNGQ9Y644 331 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 NCOR1O75376 2440 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms