RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 PPOXP50336 477 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 EIF5AP63241 154 aaKnown RBP7.24□□□□□ -1.25
SMAD4-206ENST00000588860 ZNF816Q0VGE8 651 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-206ENST00000588860 IZUMO4Q1ZYL8 232 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 TMEM30BQ3MIR4 351 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 PRAMEF5Q5TYX0 476 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 GPR157Q5UAW9 335 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 RPL7L1Q6DKI1 246 aaKnown RBP7.24□□□□□ -1.25
SMAD4-206ENST00000588860 CLEC9AQ6UXN8 241 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 BAP18Q8IXM2 172 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 PDZD9Q8IXQ8 264 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 SPAG16Q8N0X2 631 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 FAM216AQ8WUB2 273 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 H1FXQ92522 213 aaKnown RBP7.24□□□□□ -1.25
SMAD4-206ENST00000588860 CORO2AQ92828 525 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 BSCL2Q96G97 398 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-206ENST00000588860 HSD17B10Q99714 261 aaKnown RBP7.24□□□□□ -1.25
SMAD4-206ENST00000588860 ABHD14AQ9BUJ0 271 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 SLC25A32Q9H2D1 315 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 C19orf12Q9NSK7 152 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 CACNG5Q9UF02 275 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 AUP1Q9Y679 476 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 BORCS7-ASMTA0A0B4J1R7 106 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 A0A1W2PPE3 182 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 IGSF23A1L1A6 192 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 FAM24AA6NFZ4 105 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 ZG16O60844 167 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 RAMP3O60896 148 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 PITX3O75364 302 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 ATG12O94817 140 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 S1PR2O95136 353 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 MMP9P14780 707 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 GNG10P50151 68 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 RAB7AP51149 207 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 CAV2P51636 162 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 TMEM33P57088 247 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 RPL31P62899 125 aaKnown RBP7.23□□□□□ -1.25
SMAD4-206ENST00000588860 EWSR1Q01844 656 aaKnown RBP eCLIP7.23□□□□□ -1.25
SMAD4-206ENST00000588860 ID3Q02535 119 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 MEF2CQ06413 473 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-206ENST00000588860 HFEQ30201 348 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 RPL39P5Q59GN2 51 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 LRRC10Q5BKY1 277 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 UTF1Q5T230 341 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 LYPD2Q6UXB3 125 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 OR2C3Q8N628 320 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 TCTEX1D1Q8N7M0 179 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 ITLN2Q8WWU7 325 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-206ENST00000588860 AGMATQ9BSE5 352 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 IFI27L2Q9H2X8 130 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 GAL3ST2Q9H3Q3 398 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 C11orf1Q9H5F2 150 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 LPAR3Q9UBY5 353 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 PFDN2Q9UHV9 154 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 MMP24Q9Y5R2 645 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 LINC00312Q9Y6C7 94 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 ABCA4P78363 2273 aa7.23□□□□□ -1.25
SMAD4-206ENST00000588860 CSMD1Q96PZ7 3565 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 NF1P21359 2839 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 LINC00473A8K010 186 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 LYNX1G3V0Z9 82 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 ITGB1BP1O14713 200 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 TNFRSF13BO14836 293 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-206ENST00000588860 CHST1O43916 411 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 FCN3O75636 299 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 GAPDHP04406 335 aaKnown RBP7.22□□□□□ -1.25
SMAD4-206ENST00000588860 LYNX1P0DP58 116 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 RRASP10301 218 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 DUTP33316 252 aaKnown RBP7.22□□□□□ -1.25
SMAD4-206ENST00000588860 G6PCP35575 357 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 ZNF134P52741 427 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 NHLH2Q02577 135 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 ZNF273Q14593 569 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 CT45A1Q5HYN5 189 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 NCR3LG1Q68D85 454 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 Q6ZRM9 215 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 LYG1Q8N1E2 194 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 CT45A3Q8NHU0 189 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 TMED6Q8WW62 240 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 SLC25A31Q9H0C2 315 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 WFDC1Q9HC57 220 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 FAM212BQ9NTI7 297 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-206ENST00000588860 LYRM2Q9NU23 88 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-206ENST00000588860 TAS2R3Q9NYW6 316 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 CTSZQ9UBR2 303 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 F8P00451 2351 aa7.22□□□□□ -1.25
SMAD4-206ENST00000588860 CELSR2Q9HCU4 2923 aa7.21□□□□□ -1.25
SMAD4-206ENST00000588860 SAA2-SAA4A0A096LPE2 208 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 KIAA1324LA8MWY0 1029 aaPredicted RBP7.21□□□□□ -1.26
SMAD4-206ENST00000588860 TEX46H3BTG2 121 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 DVL1O14640 695 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 NDUFA2O43678 99 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 FCGR3BO75015 233 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 MMP23AO75900 390 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 JTBO76095 146 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 KRASP01116 189 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 SAA2P0DJI9 122 aaPredicted RBP7.21□□□□□ -1.26
SMAD4-206ENST00000588860 IAPPP10997 89 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 DAOP14920 347 aa7.21□□□□□ -1.26
SMAD4-206ENST00000588860 CCL3L1P16619 93 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms