RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 RCC1P18754 421 aaPredicted RBP6.4□□□□□ -1.38
VMP1-204ENST00000587259 PI3P19957 117 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 PSMB6P28072 239 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 S100A11P31949 105 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 P2RX3P56373 397 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 PRB3Q04118 309 aaPredicted RBP6.4□□□□□ -1.38
VMP1-204ENST00000587259 CATR1Q13166 79 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 PHLDA2Q53GA4 152 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 STUMQ69YW2 141 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 Q6ZPA2 131 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 ANGPTL6Q8NI99 470 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 PPP1R1CQ8WVI7 109 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 SECTM1Q8WVN6 248 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 SSBP3Q9BWW4 388 aaPredicted RBP6.4□□□□□ -1.38
VMP1-204ENST00000587259 TMEM222Q9H0R3 208 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 KIF25Q9UIL4 384 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 POLR3KQ9Y2Y1 108 aaPredicted RBP6.4□□□□□ -1.38
VMP1-204ENST00000587259 UBE2J1Q9Y385 318 aaPredicted RBP6.4□□□□□ -1.38
VMP1-204ENST00000587259 IGKV1D-17A0A075B6S4 117 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 TRGV10A0A0A0MS01 117 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 C13orf42A0A1B0GVH6 325 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 KANTRA0A1W2PQU2 76 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 ODAMA1E959 279 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 C22orf46C9J442 243 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 C12orf77C9JDV5 145 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 G3V3Q6 166 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 SMLR1H3BR10 107 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 CLDN34H7C241 214 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 LGALS8O00214 317 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 ITGB1BP1O14713 200 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 ARPC5O15511 151 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 MPC2O95563 127 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 UCP1P25874 307 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 GNRHRP30968 328 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 RAB7AP51149 207 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 GNB2P62879 340 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 EIF5AP63241 154 aaKnown RBP6.39□□□□□ -1.39
VMP1-204ENST00000587259 AESQ08117 197 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 TMEM187Q14656 261 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 TMEM155Q4W5P6 130 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 THOC7Q6I9Y2 204 aaKnown RBP6.39□□□□□ -1.39
VMP1-204ENST00000587259 ACOT7LQ6ZUV0 252 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 TBC1D26Q86UD7 250 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 ZNF546Q86UE3 836 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 LDLRAD3Q86YD5 345 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 ZNF695Q8IW36 515 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 PDZD9Q8IXQ8 264 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 ZNF645Q8N7E2 425 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 BOLLQ8N9W6 283 aaKnown RBP6.39□□□□□ -1.39
VMP1-204ENST00000587259 OR10A7Q8NGE5 316 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 FAM110DQ8TAY7 271 aaPredicted RBP6.39□□□□□ -1.39
VMP1-204ENST00000587259 RBPMSQ93062 196 aaKnown RBP6.39□□□□□ -1.39
VMP1-204ENST00000587259 COQ2Q96H96 371 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 TMEM56Q96MV1 263 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 CITED1Q99966 193 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 PCGF1Q9BSM1 259 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 MFFQ9GZY8 342 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 RDH8Q9NYR8 311 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 TMEM56-RWDD3S4R434 201 aa6.39□□□□□ -1.39
VMP1-204ENST00000587259 NBEAL2Q6ZNJ1 2754 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 IGKV1-6A0A0C4DH72 117 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 A0A1B0GW55 424 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 hADV38S2A0JD32 116 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 ZNF729A6NN14 1252 aaPredicted RBP6.38□□□□□ -1.39
VMP1-204ENST00000587259 CCSO14618 274 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 SIGLEC5O15389 551 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 SIX6O95475 246 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 HBZP02008 142 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 SERPINE2P07093 398 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 DUX4L2P0CJ85 424 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 DUX4L3P0CJ86 424 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 DUX4L4P0CJ87 422 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 DUX4L5P0CJ88 424 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 DUX4L6P0CJ89 424 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 DUX4L7P0CJ90 424 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 SLC25A6P12236 298 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 LYL1P12980 280 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 PVALBP20472 110 aaPredicted RBP6.38□□□□□ -1.39
VMP1-204ENST00000587259 VDAC1P21796 283 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 F2RP25116 425 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 CEACAM6P40199 344 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 CEBPDP49716 269 aaPredicted RBP6.38□□□□□ -1.39
VMP1-204ENST00000587259 AP2S1P53680 142 aaPredicted RBP6.38□□□□□ -1.39
VMP1-204ENST00000587259 MEF2CQ06413 473 aaPredicted RBP6.38□□□□□ -1.39
VMP1-204ENST00000587259 EDDM3AQ14507 147 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 C2orf68Q2NKX9 166 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 IAH1Q2TAA2 248 aaPredicted RBP6.38□□□□□ -1.39
VMP1-204ENST00000587259 ANKRD55Q3KP44 614 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 Q3ZCU0 254 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 LGALSLQ3ZCW2 172 aaPredicted RBP6.38□□□□□ -1.39
VMP1-204ENST00000587259 LAMTOR1Q6IAA8 161 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 PRSS54Q6PEW0 395 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 BTNL3Q6UXE8 466 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 ZNF788Q6ZQV5 615 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 ZNF818PQ6ZRF7 136 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 C9orf139Q6ZV77 190 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 SLC51BQ86UW2 128 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 FGFRL1Q8N441 504 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 PRR18Q8N4B5 295 aa6.38□□□□□ -1.39
VMP1-204ENST00000587259 CD177Q8N6Q3 437 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms