RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SCGNO76038 276 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 IGLV1-40P01703 118 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 CLEC2LP0C7M8 214 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 CD36P16671 472 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 DTYMKP23919 212 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 CHRNA7P36544 502 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 PSG5Q15238 335 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 KCTD21Q4G0X4 260 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 Q6ZS49 121 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 ZNF491Q8N8L2 437 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 LGALS14Q8TCE9 139 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 UBE2E2Q96LR5 201 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.8□□□□□ -0.2
TPM4-206ENST00000587201 GAB2Q9UQC2 676 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 FBXO7Q9Y3I1 522 aa13.8□□□□□ -0.2
TPM4-206ENST00000587201 IGKV1D-8A0A087WSZ0 117 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 SPDEFO95238 335 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 CA2P00918 260 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 RAB9AP51151 201 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 EGFEM1PQ0D2K5 195 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 TMEM267Q0VDI3 215 aaPredicted RBP13.79□□□□□ -0.2
TPM4-206ENST00000587201 HACD4Q5VWC8 232 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 MINDY2Q8NBR6 621 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 OR11H1Q8NG94 326 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 OR5M8Q8NGP6 311 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 MYOZ3Q8TDC0 251 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 FAM103A1Q9BTL3 118 aaKnown RBP13.79□□□□□ -0.2
TPM4-206ENST00000587201 ST6GALNAC5Q9BVH7 336 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 GNB4Q9HAV0 340 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 VSIG4Q9Y279 399 aa13.79□□□□□ -0.2
TPM4-206ENST00000587201 K7EIL1 84 aa13.78□□□□□ -0.2
TPM4-206ENST00000587201 EGR2P11161 476 aaPredicted RBP13.78□□□□□ -0.2
TPM4-206ENST00000587201 CRIP2P52943 208 aaPredicted RBP13.78□□□□□ -0.2
TPM4-206ENST00000587201 PITPNAQ00169 270 aa13.78□□□□□ -0.2
TPM4-206ENST00000587201 CBX3Q13185 183 aa13.78□□□□□ -0.2
TPM4-206ENST00000587201 KIAA0141Q14154 515 aaPredicted RBP13.78□□□□□ -0.2
TPM4-206ENST00000587201 IDNKQ5T6J7 187 aa13.78□□□□□ -0.2
TPM4-206ENST00000587201 PPP1R27Q86WC6 154 aa13.78□□□□□ -0.2
TPM4-206ENST00000587201 H1FOOQ8IZA3 346 aaPredicted RBP13.78□□□□□ -0.2
TPM4-206ENST00000587201 TCTEX1D1Q8N7M0 179 aa13.78□□□□□ -0.2
TPM4-206ENST00000587201 NUDCD2Q8WVJ2 157 aa13.78□□□□□ -0.2
TPM4-206ENST00000587201 OR5B12Q96R08 314 aa13.78□□□□□ -0.2
TPM4-206ENST00000587201 RHBDL2Q9NX52 303 aa13.78□□□□□ -0.2
TPM4-206ENST00000587201 FOXA2Q9Y261 457 aaPredicted RBP13.78□□□□□ -0.2
TPM4-206ENST00000587201 NUBP2Q9Y5Y2 271 aa13.78□□□□□ -0.2
TPM4-206ENST00000587201 WI2-2373I1.2A0A1W2PRP0 233 aa13.77□□□□□ -0.21
TPM4-206ENST00000587201 TMEM235A6NFC5 223 aa13.77□□□□□ -0.21
TPM4-206ENST00000587201 SLC25A17O43808 307 aa13.77□□□□□ -0.21
TPM4-206ENST00000587201 GNG2P59768 71 aa13.77□□□□□ -0.21
TPM4-206ENST00000587201 ZNF260Q3ZCT1 412 aa13.77□□□□□ -0.21
TPM4-206ENST00000587201 C19orf54Q5BKX5 351 aa13.77□□□□□ -0.21
TPM4-206ENST00000587201 UNQ5815/PRO19632Q6UWF5 114 aa13.77□□□□□ -0.21
TPM4-206ENST00000587201 ZNF562Q6V9R5 426 aa13.77□□□□□ -0.21
TPM4-206ENST00000587201 C5orf30Q96GV9 206 aa13.77□□□□□ -0.21
TPM4-206ENST00000587201 DCSTAMPQ9H295 470 aa13.77□□□□□ -0.21
TPM4-206ENST00000587201 I3L521 148 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 J3QRK9 145 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 SOX15O60248 233 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 LGALS7P47929 136 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 TAGLNQ01995 201 aaKnown RBP13.76□□□□□ -0.21
TPM4-206ENST00000587201 FHL3Q13643 280 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 ACTBL2Q562R1 376 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 DEFB121Q5J5C9 76 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 BVESQ8NE79 360 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 LFNGQ8NES3 379 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 OR1N2Q8NGR9 330 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 OR5H6Q8NGV6 325 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 CASTOR1Q8WTX7 329 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 HARBI1Q96MB7 349 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 TPSG1Q9NRR2 321 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 ZMAT5Q9UDW3 170 aaKnown RBP13.76□□□□□ -0.21
TPM4-206ENST00000587201 ETV7Q9Y603 341 aa13.76□□□□□ -0.21
TPM4-206ENST00000587201 SHOXO15266 292 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 CTXN2P0C2S0 81 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 OR8U8P0C7N1 319 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 CD40LGP29965 261 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 SCAND1P57086 179 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 GNB1P62873 340 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 RUNX1Q01196 453 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 ZNF616Q08AN1 781 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 FXYD3Q14802 87 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 RTL8BQ17RB0 113 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 AKIRIN2Q53H80 203 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 C9orf66Q5T8R8 295 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 PYHIN1Q6K0P9 492 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 ARPC1AQ92747 370 aa13.75□□□□□ -0.21
TPM4-206ENST00000587201 SEC14L6B5MCN3 397 aa13.74□□□□□ -0.21
TPM4-206ENST00000587201 CNIH1O95406 144 aa13.74□□□□□ -0.21
TPM4-206ENST00000587201 IGLV2-23P01705 113 aa13.74□□□□□ -0.21
TPM4-206ENST00000587201 RRASP10301 218 aa13.74□□□□□ -0.21
TPM4-206ENST00000587201 NFYAP23511 347 aaPredicted RBP13.74□□□□□ -0.21
TPM4-206ENST00000587201 DUTP33316 252 aaKnown RBP13.74□□□□□ -0.21
TPM4-206ENST00000587201 LUMP51884 338 aaPredicted RBP13.74□□□□□ -0.21
TPM4-206ENST00000587201 DGCR2P98153 550 aa13.74□□□□□ -0.21
TPM4-206ENST00000587201 TIMM50Q3ZCQ8 353 aa13.74□□□□□ -0.21
TPM4-206ENST00000587201 TMEM177Q53S58 311 aa13.74□□□□□ -0.21
TPM4-206ENST00000587201 CNIH2Q6PI25 160 aa13.74□□□□□ -0.21
TPM4-206ENST00000587201 GRPEL2Q8TAA5 225 aa13.74□□□□□ -0.21
TPM4-206ENST00000587201 ADTRPQ96IZ2 230 aa13.74□□□□□ -0.21
TPM4-206ENST00000587201 VCX3AQ9NNX9 186 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms