RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 RAB40CQ96S21 281 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 GOLT1BQ9Y3E0 138 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 PCNX1Q96RV3 2341 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 TGIF2-C20orf24A0A0A6YYL0 155 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 DUXBA0A1W2PPF3 345 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 A8MXE2 369 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 CXCL1P09341 107 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 BMP5P22003 454 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 KIR2DL2P43627 348 aaPredicted RBP8.8□□□□□ -1
TOP3A-209ENST00000580095 ERVFRD-1P60508 538 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 PKIAP61925 76 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 TLE4Q04727 773 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 ETFRF1Q6IPR1 90 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 IL22RA2Q969J5 263 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 COQ2Q96H96 371 aa8.8□□□□□ -1
TOP3A-209ENST00000580095 YIF1AO95070 293 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 CECR9P0C854 216 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 MDKP21741 143 aaPredicted RBP8.79□□□□□ -1
TOP3A-209ENST00000580095 BRWD1-AS2P59051 145 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 ZNF146Q15072 292 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 RHEBQ15382 184 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 ZNF787Q6DD87 383 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 ZNF561Q8N587 486 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 GALMQ96C23 342 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 R3HDM4Q96D70 268 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 RCC1LQ96I51 464 aaKnown RBP8.79□□□□□ -1
TOP3A-209ENST00000580095 LIN7CQ9NUP9 197 aaKnown RBP8.79□□□□□ -1
TOP3A-209ENST00000580095 KCNIP1Q9NZI2 227 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 CLCF1Q9UBD9 225 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 DUSP13Q9UII6 198 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 RELNP78509 3460 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 CEP295Q9C0D2 2601 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 AP4M1O00189 453 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 RBX1P62877 108 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 SPRNQ5BIV9 151 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 Q6ZT83 130 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 WDR31Q8NA23 367 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 OR13A1Q8NGR1 328 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 Q8WTZ3 238 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 RBKSQ9H477 322 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 MBNL3Q9NUK0 354 aaKnown RBP8.79□□□□□ -1
TOP3A-209ENST00000580095 PSG11Q9UQ72 335 aa8.79□□□□□ -1
TOP3A-209ENST00000580095 IGHV3OR15-7A0A075B7D8 119 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 DLEU1O43261 78 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 DFFBO76075 338 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 IGKV1D-33P01593 117 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 IGKV1-33P01594 117 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 COL8A2P25067 703 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 COL10A1Q03692 680 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 UTF1Q5T230 341 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 CFAP161Q6P656 301 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 VHLLQ6RSH7 139 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 LRP11Q86VZ4 500 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 ZNF610Q8N9Z0 462 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 MUCL1Q96DR8 90 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 TMEM30CPA0ZSE6 113 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 CEBPZOSA8MTT3 80 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 IQCF6A8MYZ5 107 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 ZG16O60844 167 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 MMP9P14780 707 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 SLC38A11Q08AI6 406 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 DEFB109BQ30KR1 87 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 FAM201AQ5SY85 155 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 WDR82Q6UXN9 313 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 VKORC1L1Q8N0U8 176 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 GATAD1Q8WUU5 269 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 NIPSNAP3BQ9BS92 247 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 SLC25A22Q9H936 323 aa8.78□□□□□ -1
TOP3A-209ENST00000580095 LINC00473A8K010 186 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 CRYABP02511 175 aaKnown RBP8.77□□□□□ -1
TOP3A-209ENST00000580095 MDH2P40926 338 aaKnown RBP8.77□□□□□ -1
TOP3A-209ENST00000580095 MSMPQ1L6U9 139 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 ZNF674Q2M3X9 581 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 PDZD11Q5EBL8 140 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 ZNF506Q5JVG8 444 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 Q8IYB0 196 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 RPRMLQ8N4K4 120 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 OR2Z1Q8NG97 314 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 LEAP2Q969E1 77 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 FAM122AQ96E09 287 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 TMEM208Q9BTX3 173 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 WIPI2Q9Y4P8 454 aa8.77□□□□□ -1
TOP3A-209ENST00000580095 ACACAQ13085 2346 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 PKDREJQ9NTG1 2253 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 ODAMA1E959 279 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 CEACAM1P13688 526 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 CLEC12BQ2HXU8 276 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 SP5Q6BEB4 398 aaPredicted RBP8.77□□□□□ -1.01
TOP3A-209ENST00000580095 HEPN1Q6WQI6 88 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 MOB1BQ7L9L4 216 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 OR8G5Q8NG78 346 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 NINJ1Q92982 152 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 LSM10Q969L4 123 aaKnown RBP8.77□□□□□ -1.01
TOP3A-209ENST00000580095 LOC102723971A0A1B0GUV8 181 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 TMEM210A6NLX4 147 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 NPIPB11E5RHQ5 1161 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 LINC00614P0C842 121 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 CD200P41217 278 aa8.77□□□□□ -1.01
TOP3A-209ENST00000580095 KIAA0141Q14154 515 aaPredicted RBP8.77□□□□□ -1.01
TOP3A-209ENST00000580095 C4orf17Q53FE4 359 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms