RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 H1FXQ92522 213 aaKnown RBP8.34□□□□□ -1.07
SS18-210ENST00000578700 IL22RA2Q969J5 263 aa8.34□□□□□ -1.07
SS18-210ENST00000578700 TOLLIPQ9H0E2 274 aa8.34□□□□□ -1.07
SS18-210ENST00000578700 OR2D2Q9H210 308 aa8.34□□□□□ -1.07
SS18-210ENST00000578700 TAS2R3Q9NYW6 316 aa8.34□□□□□ -1.07
SS18-210ENST00000578700 LINC00312Q9Y6C7 94 aa8.34□□□□□ -1.07
SS18-210ENST00000578700 WNK1Q9H4A3 2382 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 KBTBD11-OT1A0A1B0GTJ5 212 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 C15orf65H3BRN8 121 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 F2RL2O00254 374 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 GPR37O15354 613 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 TNFSF12O43508 249 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 YPEL1O60688 119 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 TSC22D2O75157 780 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 IGHV2-5P01817 119 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 WNT2P09544 360 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 SLC25A4P12235 298 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 PRTN3P24158 256 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 PPP1CCP36873 323 aaKnown RBP8.33□□□□□ -1.08
SS18-210ENST00000578700 GPR12P47775 334 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 RPL31P62899 125 aaKnown RBP8.33□□□□□ -1.08
SS18-210ENST00000578700 LTC4SQ16873 150 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 LRRC37A5PQ49AS3 106 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 GGNBP1Q5YKI7 109 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 C5orf24Q7Z6I8 188 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 BCL6BQ8N143 479 aaPredicted RBP8.33□□□□□ -1.08
SS18-210ENST00000578700 TCTEX1D1Q8N7M0 179 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 OR10A7Q8NGE5 316 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 GLYATL2Q8WU03 294 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 RBPMSQ93062 196 aaKnown RBP8.33□□□□□ -1.08
SS18-210ENST00000578700 WDR89Q96FK6 387 aaPredicted RBP8.33□□□□□ -1.08
SS18-210ENST00000578700 TMEM56Q96MV1 263 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 YPEL2Q96QA6 119 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 MFFQ9GZY8 342 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 DCAF16Q9NXF7 216 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 PRR13Q9NZ81 148 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 KAAG1Q9UBP8 84 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 CLN8Q9UBY8 286 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 TMEM56-RWDD3S4R434 201 aa8.33□□□□□ -1.08
SS18-210ENST00000578700 TRBV23-1A0A0A0MS06 115 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 IGHV3-43A0A0B4J1X8 118 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 A0A0D9SG52 128 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 DNAJC9-AS1A6NH13 148 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 MPC2O95563 127 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 CDS2O95674 445 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 IGHV3-43DP0DP04 118 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 RPA2P15927 270 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 OMGP23515 440 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 UCP1P25874 307 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 S100A10P60903 97 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 TMEM65Q6PI78 240 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 ZNF66Q6ZN08 573 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 OR11H4Q8NGC9 324 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 OR52M1Q8NGK5 317 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 OR51H1Q8NH63 302 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 CD300LFQ8TDQ1 290 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 CORO2AQ92828 525 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 RRNAD1Q96FB5 475 aaKnown RBP8.32□□□□□ -1.08
SS18-210ENST00000578700 TP53RKQ96S44 253 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 HSD17B10Q99714 261 aaKnown RBP8.32□□□□□ -1.08
SS18-210ENST00000578700 DCTN5Q9BTE1 182 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 ZC4H2Q9NQZ6 224 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 IDI2-AS1Q9NZ38 188 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 MIOXQ9UGB7 285 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 RNF150Q9ULK6 438 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 PSG11Q9UQ72 335 aa8.32□□□□□ -1.08
SS18-210ENST00000578700 IGHV3OR16-10A0A075B7F0 116 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 DVL1O14640 695 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 ITGB1BP1O14713 200 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 OR2F2O95006 317 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 SCGB1D2O95969 90 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 SELLP14151 372 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 PVALBP20472 110 aaPredicted RBP8.31□□□□□ -1.08
SS18-210ENST00000578700 MDKP21741 143 aaPredicted RBP8.31□□□□□ -1.08
SS18-210ENST00000578700 VDAC1P21796 283 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 GATA3P23771 443 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 NFYBP25208 207 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 OR2F1Q13607 317 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 GNMTQ14749 295 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 MORN2Q502X0 79 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 Q5BKY6 102 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 LYZL2Q7Z4W2 148 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 DRAM1Q8N682 238 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 SLC35G3Q8N808 338 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 OR8B3Q8NGG8 313 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 TCTEX1D2Q8WW35 142 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 DCUN1D4Q92564 292 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 ZNF714Q96N38 554 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 OR8B2Q96RD0 313 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 MS4A7Q9GZW8 240 aaPredicted RBP8.31□□□□□ -1.08
SS18-210ENST00000578700 PLSCR3Q9NRY6 295 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 GFOD1Q9NXC2 390 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 NUP50Q9UKX7 468 aa8.31□□□□□ -1.08
SS18-210ENST00000578700 A0A1B0GW55 424 aa8.3□□□□□ -1.08
SS18-210ENST00000578700 hCG_1809904A0A1W2PP81 198 aa8.3□□□□□ -1.08
SS18-210ENST00000578700 A0A1W2PPE2 198 aa8.3□□□□□ -1.08
SS18-210ENST00000578700 KANTRA0A1W2PQU2 76 aa8.3□□□□□ -1.08
SS18-210ENST00000578700 A0A1W2PR64 198 aa8.3□□□□□ -1.08
SS18-210ENST00000578700 A0A1W2PRV1 198 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms