RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 MARCH11A6NNE9 402 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 CEBPZOSA8MTT3 80 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 TNFRSF13BO14836 293 aaPredicted RBP9.19□□□□□ -0.94
SKA2-204ENST00000578519 APOA2P02652 100 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 OR8U8P0C7N1 319 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 FAM157CP0CG43 387 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 G6PCP35575 357 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 CAMLGP49069 296 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 DYNLT3P51808 116 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 HOXA4Q00056 320 aaPredicted RBP9.19□□□□□ -0.94
SKA2-204ENST00000578519 PJVKQ0ZLH3 352 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 CT45A1Q5HYN5 189 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 TOR2AQ5JU69 321 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 PRAMEF5Q5TYX0 476 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 SLC25A48Q6ZT89 311 aaKnown RBP9.19□□□□□ -0.94
SKA2-204ENST00000578519 LYG1Q8N1E2 194 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 LILRB2Q8N423 598 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 LFNGQ8NES3 379 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 OR5C1Q8NGR4 320 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 CT45A3Q8NHU0 189 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 PINX1Q96BK5 328 aaKnown RBP9.19□□□□□ -0.94
SKA2-204ENST00000578519 PARD6GQ9BYG4 376 aaPredicted RBP9.19□□□□□ -0.94
SKA2-204ENST00000578519 REG4Q9BYZ8 158 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 HIPK2Q9H2X6 1198 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 IFI27L2Q9H2X8 130 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 ENY2Q9NPA8 101 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 FKBP11Q9NYL4 201 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 RALYQ9UKM9 306 aaKnown RBP9.19□□□□□ -0.94
SKA2-204ENST00000578519 ZGRF1Q86YA3 2104 aa9.19□□□□□ -0.94
SKA2-204ENST00000578519 KIAA1324LA8MWY0 1029 aaPredicted RBP9.18□□□□□ -0.94
SKA2-204ENST00000578519 DVL1O14640 695 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 SOX15O60248 233 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 TSPAN15O95858 294 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 IFNA17P01571 189 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 DANCRP0C864 163 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 SELLP14151 372 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 PRRX1P54821 245 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 SPCS3P61009 180 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 CLINT1Q14677 625 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 OR2B11Q5JQS5 317 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 SPANXN5Q5MJ07 72 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 AKR1C8PQ5T2L2 129 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 NCR3LG1Q68D85 454 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 ZCCHC24Q8N2G6 241 aaKnown RBP9.18□□□□□ -0.94
SKA2-204ENST00000578519 LINC00311Q8N616 119 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 OR8B3Q8NGG8 313 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 OR2G3Q8NGZ4 309 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 DTD1Q8TEA8 209 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 NEUROG1Q92886 237 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 TNFRSF14Q92956 283 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 TMEM186Q96B77 213 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 OR8B2Q96RD0 313 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 PBDC1Q9BVG4 233 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 RBKSQ9H477 322 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 NUP50Q9UKX7 468 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 SHANK1Q9Y566 2161 aa9.18□□□□□ -0.94
SKA2-204ENST00000578519 BTBD17A6NE02 478 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 LINC00473A8K010 186 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 RAMP3O60896 148 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 CST7O76096 145 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 PLAUP00749 431 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 HBE1P02100 147 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 RBP4P02753 201 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 P0C879 139 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 IAPPP10997 89 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 PAX9P55771 341 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 ATP5IP56385 69 aaPredicted RBP9.17□□□□□ -0.94
SKA2-204ENST00000578519 TLE4Q04727 773 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 PEA15Q15121 130 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 TMEM155Q4W5P6 130 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 PXDC1Q5TGL8 231 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 TMEM200BQ69YZ2 307 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 Q6ZRM9 215 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 HSD17B11Q8NBQ5 300 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 ZNF439Q8NDP4 499 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 OR10P1Q8NGE3 313 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 HRH4Q9H3N8 390 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 WFDC1Q9HC57 220 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 PRNDQ9UKY0 176 aa9.17□□□□□ -0.94
SKA2-204ENST00000578519 SAA2-SAA4A0A096LPE2 208 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 NXPH3O95157 252 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 SAA2P0DJI9 122 aaPredicted RBP9.16□□□□□ -0.94
SKA2-204ENST00000578519 MC5RP33032 325 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 GNG10P50151 68 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 ZNF134P52741 427 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 RAB11AP62491 216 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 SERF2P84101 59 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 TFF3Q07654 80 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 POU2AF1Q16633 256 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 AARDQ4LEZ3 155 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 RPL39P5Q59GN2 51 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 Q6ZRG5 221 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 TMEM217Q8N7C4 229 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 OR10X1Q8NGY0 326 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 OR9G1Q8NH87 305 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 OSR1Q8TAX0 266 aaPredicted RBP9.16□□□□□ -0.94
SKA2-204ENST00000578519 NEIL1Q96FI4 390 aaPredicted RBP9.16□□□□□ -0.94
SKA2-204ENST00000578519 C5orf30Q96GV9 206 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 NARS2Q96I59 477 aaKnown RBP9.16□□□□□ -0.94
SKA2-204ENST00000578519 PSMG3Q9BT73 122 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms