RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 VSIG4Q9Y279 399 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 RBM7Q9Y580 266 aaKnown RBP6.5□□□□□ -1.37
COPS3-215ENST00000578317 MINOS1-NBL1R4GNA1 71 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 CSPG4Q6UVK1 2322 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 INMT-MINDY4F8WBC2 141 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 PGLYRP1O75594 196 aaPredicted RBP6.49□□□□□ -1.37
COPS3-215ENST00000578317 B3GALNT1O75752 331 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 IL5P05113 134 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 HTR1DP28221 377 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 S100GP29377 79 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 EIF4EBP1Q13541 118 aaPredicted RBP6.49□□□□□ -1.37
COPS3-215ENST00000578317 TRIM16LQ309B1 348 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 TMEM128Q5BJH2 165 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 ZNF66Q6ZN08 573 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 ZNF818PQ6ZRF7 136 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 ZNF833PQ6ZTB9 187 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 KCTD9Q7L273 389 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 CENPSQ8N2Z9 138 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 PNKDQ8N490 385 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 DRAM1Q8N682 238 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 TEX29Q8N6K0 151 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 NUDT10Q8NFP7 164 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 OR4P4Q8NGL7 312 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 OR10X1Q8NGY0 326 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 TOMM40LQ969M1 308 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 NUDT11Q96G61 164 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 ABHD14BQ96IU4 210 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 C18orf12Q96KH6 178 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 S1PR3Q99500 378 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 C1orf43Q9BWL3 253 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 C20orf85Q9H1P6 137 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 SLC2A9Q9NRM0 540 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 FAM212BQ9NTI7 297 aaPredicted RBP6.49□□□□□ -1.37
COPS3-215ENST00000578317 NUDT15Q9NV35 164 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 SDHAF2Q9NX18 166 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 DPM3Q9P2X0 92 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 RNF150Q9ULK6 438 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 FLVCR2Q9UPI3 526 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 C14orf166Q9Y224 244 aaKnown RBP6.49□□□□□ -1.37
COPS3-215ENST00000578317 TBL2Q9Y4P3 447 aaKnown RBP6.49□□□□□ -1.37
COPS3-215ENST00000578317 AMMECR1Q9Y4X0 333 aaPredicted RBP6.49□□□□□ -1.37
COPS3-215ENST00000578317 KIAA2026Q5HYC2 2103 aa6.49□□□□□ -1.37
COPS3-215ENST00000578317 LEUTXA8MZ59 168 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 OOSP1A8MZH6 123 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 MPPED1O15442 326 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 CD5LO43866 347 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 IGHV3-7P01780 117 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 PGAM2P15259 253 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 SPNP16150 400 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 IL3RAP26951 378 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 CEACAM3P40198 252 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 GPR12P47775 334 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 DLX1P56177 255 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 PIGPP57054 158 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 TAS2R31P59538 309 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 KRTAP1-1Q07627 177 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 C11orf88Q6PI97 169 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 LYG1Q8N1E2 194 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 TCTEX1D1Q8N7M0 179 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 LHX4Q969G2 390 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 MALSU1Q96EH3 234 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 GALNT14Q96FL9 552 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 ADTRPQ96IZ2 230 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 HSD17B10Q99714 261 aaKnown RBP6.48□□□□□ -1.37
COPS3-215ENST00000578317 OR2D2Q9H210 308 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 KCNIP3Q9Y2W7 256 aa6.48□□□□□ -1.37
COPS3-215ENST00000578317 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.48□□□□□ -1.373e-6■■■■■ 46.6
COPS3-215ENST00000578317 SAA2-SAA4A0A096LPE2 208 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 IGHV1-69DA0A0B4J2H0 117 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 A0A1W2PPE3 182 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 CRYM-AS1A6NIL9 109 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 HSD17B6O14756 317 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 ARPC1BO15143 372 aaKnown RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 TXNL1O43396 289 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 PRAF2O60831 178 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 DHFRP00374 187 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 FSHBP01225 129 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 IGHV1-69P01742 117 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 GAPDHP04406 335 aaKnown RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 RLN1P04808 185 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 ARG1P05089 322 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 SAA2P0DJI9 122 aaPredicted RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 VSIG10L2P0DP72 767 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 PI3P19957 117 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 COX7A1P24310 79 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 F2RP25116 425 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 DUTP33316 252 aaKnown RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 GNG10P50151 68 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 ZNF816Q0VGE8 651 aaPredicted RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 BAMBIQ13145 260 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 ABCA11PQ4W5N1 156 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 KLF17Q5JT82 389 aaPredicted RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 GPR157Q5UAW9 335 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 CCDC71LQ8N9Z2 235 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 NANPQ8TBE9 248 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 RTN4IP1Q8WWV3 396 aaPredicted RBP6.47□□□□□ -1.37
COPS3-215ENST00000578317 TMEM230Q96A57 120 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 AJUBAQ96IF1 538 aa6.47□□□□□ -1.37
COPS3-215ENST00000578317 KRTAP4-6Q9BYQ5 205 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms