RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 M0R2Z0 102 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 SYNGR3O43761 229 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 ZIC3O60481 467 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 SNRPCP09234 159 aaKnown RBP9.33□□□□□ -0.92
RNF43-203ENST00000577716 TIPARPQ7Z3E1 657 aaKnown RBP9.33□□□□□ -0.92
RNF43-203ENST00000577716 DRAM1Q8N682 238 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 ZNF645Q8N7E2 425 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 NFAM1Q8NET5 270 aaPredicted RBP9.33□□□□□ -0.92
RNF43-203ENST00000577716 OR10S1Q8NGN2 331 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 OR1L8Q8NGR8 309 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 FLYWCH2Q96CP2 140 aaKnown RBP9.33□□□□□ -0.92
RNF43-203ENST00000577716 SAP30LQ9HAJ7 183 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 IL19Q9UHD0 177 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 YTHDF2Q9Y5A9 579 aaKnown RBP9.33□□□□□ -0.92
RNF43-203ENST00000577716 FNDC1Q4ZHG4 1894 aaPredicted RBP9.33□□□□□ -0.92
RNF43-203ENST00000577716 UCP1P25874 307 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 GLIPR1P48060 266 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 SRSF3P84103 164 aaKnown RBP9.33□□□□□ -0.92
RNF43-203ENST00000577716 MIC13Q5XKP0 118 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 ZNF385CQ66K41 422 aaPredicted RBP9.33□□□□□ -0.92
RNF43-203ENST00000577716 OR4C5Q8NGB2 326 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 RSPO3Q9BXY4 272 aaPredicted RBP9.33□□□□□ -0.92
RNF43-203ENST00000577716 PILRBQ9UKJ0 227 aa9.33□□□□□ -0.92
RNF43-203ENST00000577716 RAB29O14966 203 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 ELOBQ15370 118 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 C11orf42Q8N5U0 333 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 OR1P1Q8NH06 330 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 LSM10Q969L4 123 aaKnown RBP9.32□□□□□ -0.92
RNF43-203ENST00000577716 RCC1LQ96I51 464 aaKnown RBP9.32□□□□□ -0.92
RNF43-203ENST00000577716 CISD1Q9NZ45 108 aaKnown RBP9.32□□□□□ -0.92
RNF43-203ENST00000577716 ONECUT1Q9UBC0 465 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 Q56UQ5 140 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 BET1LQ9NYM9 111 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 ZNF785A8K8V0 405 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 S1PR2O95136 353 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 WNT5AP41221 380 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 REG1BP48304 166 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 PRRX1P54821 245 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 RPL31P62899 125 aaKnown RBP9.32□□□□□ -0.92
RNF43-203ENST00000577716 NHLH1Q02575 133 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 PPP1R32Q7Z5V6 425 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 FAM216AQ8WUB2 273 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 PARLQ9H300 379 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 ZNF407Q9C0G0 2248 aa9.32□□□□□ -0.92
RNF43-203ENST00000577716 MARCH11A6NNE9 402 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 F8VVB4 439 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 F8VWA3 439 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 GDF9O60383 454 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
RNF43-203ENST00000577716 COL8A1P27658 744 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 PTTG1IPP53801 180 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 MFAP2P55001 183 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 GNB2P62879 340 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 ZNF506Q5JVG8 444 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 GLRX5Q86SX6 157 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 LILRB1Q8NHL6 650 aaPredicted RBP9.31□□□□□ -0.92
RNF43-203ENST00000577716 TXNDC17Q9BRA2 123 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 ODAMA1E959 279 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 K7ESF4 209 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 FGF16O43320 207 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 OR5AL1P0C617 328 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 CCL8P80075 99 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 OR2D3Q8NGH3 330 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 FGF11Q92914 225 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 OR51B2Q9Y5P1 312 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 IGLV3-12A0A075B6K2 115 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 CBY3A6NI87 242 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 LRRC3CA6NJW4 275 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 FAM157AC9JC47 383 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 EGR1P18146 543 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 SLC25A53Q5H9E4 307 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 HEATR1Q9H583 2144 aaKnown RBP9.31□□□□□ -0.92
RNF43-203ENST00000577716 NEURL1O76050 574 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 P01737 135 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 APELAP0DMC3 54 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 C10orf113Q5VZT2 155 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 FAM89BQ8N5H3 189 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 CA5BP1Q8WTZ4 195 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 OR2V2Q96R30 315 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 TIMP4Q99727 224 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 HSPB9Q9BQS6 159 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 PSMG3Q9BT73 122 aaPredicted RBP9.31□□□□□ -0.92
RNF43-203ENST00000577716 GGACTQ9BVM4 153 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 IL36RNQ9UBH0 155 aa9.31□□□□□ -0.92
RNF43-203ENST00000577716 IGKV1D-8A0A087WSZ0 117 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 A0A0A6YYD4 124 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 SPAARA0A1B0GVQ0 90 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 KBTBD11O94819 623 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 SRP19P09132 144 aaKnown RBP9.3□□□□□ -0.92
RNF43-203ENST00000577716 AGAP20933 346 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 DDTP30046 118 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 SRP14P37108 136 aaKnown RBP9.3□□□□□ -0.92
RNF43-203ENST00000577716 OR8G5Q8NG78 346 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 KLF14Q8TD94 323 aaPredicted RBP9.3□□□□□ -0.92
RNF43-203ENST00000577716 IL17BQ9UHF5 180 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 NOTCH3Q9UM47 2321 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 A0A1W2PRD5 423 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 A0A1W2PRF3 423 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 A0A1W2PRM7 423 aa9.3□□□□□ -0.92
RNF43-203ENST00000577716 FADS6Q8N9I5 356 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms