RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 BLVRBP30043 206 aaPredicted RBP2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 CMPK1P30085 196 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 AGTR1P30556 359 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 SRIP30626 198 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 TGFBR1P36897 503 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 LEPP41159 167 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 EMDP50402 254 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 RAB8AP61006 207 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 RPS25P62851 125 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC35B1P78383 322 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 RAB40BQ12829 278 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 PDGFRLQ15198 375 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 SNRNP35Q16560 246 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 HLA-DRB5Q30154 266 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 TMEM52BQ4KMG9 183 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 TRMT12Q53H54 448 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 C1orf195Q5TG92 126 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 ZFAND6Q6FIF0 208 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 XAF1Q6GPH4 301 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF773Q6PK81 442 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 C12orf54Q6X4T0 127 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 OAFQ86UD1 273 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 GKN2Q86XP6 184 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 LINC00471Q8N535 108 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 RNF182Q8N6D2 247 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 CLDN19Q8N6F1 224 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 GATD1Q8NB37 220 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 BLNKQ8WV28 456 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 OR5P3Q8WZ94 311 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 RDH12Q96NR8 316 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 YPEL4Q96NS1 127 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 IP6K3Q96PC2 410 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 CLCC1Q96S66 551 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 S100A13Q99584 98 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 NAA38Q9BRA0 125 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 DOHHQ9BU89 302 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 PRORYQ9H606 182 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 RNF167Q9H6Y7 350 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 TAF9BQ9HBM6 251 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 DOK5Q9P104 306 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 TRAPPC2LQ9UL33 140 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 SNX10Q9Y5X0 201 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF780BQ9Y6R6 833 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 SETD1AO15047 1707 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 KIAA1551Q9HCM1 1747 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 DENND4AQ7Z401 1863 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 CLASP1Q7Z460 1538 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 DUOX2Q9NRD8 1548 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 FRMPD1Q5SYB0 1578 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TRAV36DV7A0A075B6V5 113 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 A0A096LNJ9 63 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 LOC107984640A0A0U1RRK4 108 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 A0A1B0GX51 115 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 H3BMH7 237 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 M0R233 179 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TAAR5O14804 337 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 RGS16O15492 202 aaPredicted RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TAPBPO15533 448 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 SYNGR1O43759 233 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 FAM189A1O60320 539 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 MPDU1O75352 247 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 EEDO75530 441 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TNFSF13O75888 250 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 GABARAPO95166 117 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 CA1P00915 261 aaPredicted RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 CATP04040 527 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 MAS1P04201 325 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 REG1AP05451 166 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TACSTD2P09758 323 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 IGLC1P0CG04 106 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 CT45A6P0DMU7 189 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 CT45A5P0DMU8 189 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 CT45A7P0DMV0 189 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 OR12D1P0DN82 309 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 ADCYAP1P18509 176 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 CD34P28906 385 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 PYCR1P32322 319 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 GABRA3P34903 492 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 OPRD1P41143 372 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 MAGEA5P43359 124 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 CXCL12P48061 93 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 CLDN6P56747 220 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 NCS1P62166 190 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 RPL31P62899 125 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 MEF2CQ06413 473 aaPredicted RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST3H3Q16695 136 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 IAH1Q2TAA2 248 aaPredicted RBP2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 CT45A1Q5HYN5 189 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TMEM255AQ5JRV8 349 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 GLYATL3Q5SZD4 288 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TMEM236Q5W0B7 351 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 GLT8D1Q68CQ7 371 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 DNAJC24Q6P3W2 148 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 TBPL2Q6SJ96 375 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 ARL9Q6T311 187 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 GLIPR1L1Q6UWM5 242 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 C6orf120Q7Z4R8 191 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 HSD11B1LQ7Z5J1 315 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 ACOT1Q86TX2 421 aa2.32□□□□□ -2.04
SMCHD1-202ENST00000577300 OR2L13Q8N349 312 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms