RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 SDHAF2Q9NX18 166 aa16.52■□□□□ 0.24
HCFC1R1-209ENST00000576921 RHBDL2Q9NX52 303 aa16.52■□□□□ 0.24
HCFC1R1-209ENST00000576921 FCN1O00602 326 aa16.51■□□□□ 0.23
HCFC1R1-209ENST00000576921 PPIFP30405 207 aaKnown RBP16.51■□□□□ 0.23
HCFC1R1-209ENST00000576921 CX3CL1P78423 397 aa16.51■□□□□ 0.23
HCFC1R1-209ENST00000576921 PSG5Q15238 335 aa16.51■□□□□ 0.23
HCFC1R1-209ENST00000576921 Q6ZS49 121 aa16.51■□□□□ 0.23
HCFC1R1-209ENST00000576921 C4orf3Q8WVX3 66 aa16.51■□□□□ 0.23
HCFC1R1-209ENST00000576921 DPF1Q92782 380 aa16.51■□□□□ 0.23
HCFC1R1-209ENST00000576921 RNF5Q99942 180 aa16.51■□□□□ 0.23
HCFC1R1-209ENST00000576921 GPR61Q9BZJ8 451 aa16.51■□□□□ 0.23
HCFC1R1-209ENST00000576921 KLK15Q9H2R5 256 aa16.51■□□□□ 0.23
HCFC1R1-209ENST00000576921 A0A1W2PN81 502 aa16.5■□□□□ 0.23
HCFC1R1-209ENST00000576921 CHRNA7P36544 502 aa16.5■□□□□ 0.23
HCFC1R1-209ENST00000576921 SRSF7Q16629 238 aaKnown RBP eCLIP16.5■□□□□ 0.23
HCFC1R1-209ENST00000576921 ZNF660Q6AZW8 331 aaPredicted RBP16.5■□□□□ 0.23
HCFC1R1-209ENST00000576921 OR5H6Q8NGV6 325 aa16.5■□□□□ 0.23
HCFC1R1-209ENST00000576921 FLYWCH2Q96CP2 140 aaKnown RBP16.5■□□□□ 0.23
HCFC1R1-209ENST00000576921 C5orf30Q96GV9 206 aa16.5■□□□□ 0.23
HCFC1R1-209ENST00000576921 VCX3AQ9NNX9 186 aa16.5■□□□□ 0.23
HCFC1R1-209ENST00000576921 GAB2Q9UQC2 676 aa16.5■□□□□ 0.23
HCFC1R1-209ENST00000576921 ETV7Q9Y603 341 aa16.5■□□□□ 0.23
HCFC1R1-209ENST00000576921 J3QRK9 145 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 SLC25A17O43808 307 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 SPDEFO95238 335 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 CA2P00918 260 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 PITPNAQ00169 270 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 CBX3Q13185 183 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 H1FOOQ8IZA3 346 aaPredicted RBP16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 TSPAN14Q8NG11 270 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 SLC25A38Q96DW6 304 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 OR5B12Q96R08 314 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 FAM103A1Q9BTL3 118 aaKnown RBP16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 MCRIP2Q9BUT9 160 aaKnown RBP16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 GNB4Q9HAV0 340 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 TPSG1Q9NRR2 321 aa16.49■□□□□ 0.23
HCFC1R1-209ENST00000576921 TNFAIP8O95379 198 aa16.48■□□□□ 0.23
HCFC1R1-209ENST00000576921 IGLV1-40P01703 118 aa16.48■□□□□ 0.23
HCFC1R1-209ENST00000576921 KRTAP10-11P60412 298 aa16.48■□□□□ 0.23
HCFC1R1-209ENST00000576921 TIMM50Q3ZCQ8 353 aa16.48■□□□□ 0.23
HCFC1R1-209ENST00000576921 ZNF260Q3ZCT1 412 aa16.48■□□□□ 0.23
HCFC1R1-209ENST00000576921 MYOZ3Q8TDC0 251 aa16.48■□□□□ 0.23
HCFC1R1-209ENST00000576921 CASTOR1Q8WTX7 329 aa16.48■□□□□ 0.23
HCFC1R1-209ENST00000576921 FOXA2Q9Y261 457 aaPredicted RBP16.48■□□□□ 0.23
HCFC1R1-209ENST00000576921 A0A087WXM4 84 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 TGFBR1P36897 503 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 SCAND1P57086 179 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 RTL8BQ17RB0 113 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 PPP1R27Q86WC6 154 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 MINDY2Q8NBR6 621 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 BVESQ8NE79 360 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 OR5M8Q8NGP6 311 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 GRPEL2Q8TAA5 225 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 HARBI1Q96MB7 349 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 DCSTAMPQ9H295 470 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 VSIG4Q9Y279 399 aa16.47■□□□□ 0.23
HCFC1R1-209ENST00000576921 TRAV18A0A075B6X5 111 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 AIREO43918 545 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 SSX5O60225 188 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 EGR2P11161 476 aaPredicted RBP16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 NFYAP23511 347 aaPredicted RBP16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 RAB9AP51151 201 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 CRIP2P52943 208 aaPredicted RBP16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 GNB1P62873 340 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 TMEM267Q0VDI3 215 aaPredicted RBP16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 C19orf54Q5BKX5 351 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 UNQ5815/PRO19632Q6UWF5 114 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 ZNF491Q8N8L2 437 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 OR11H1Q8NG94 326 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 ARPC1AQ92747 370 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 UBE2E2Q96LR5 201 aa16.46■□□□□ 0.23
HCFC1R1-209ENST00000576921 SHOXO15266 292 aa16.45■□□□□ 0.22
HCFC1R1-209ENST00000576921 SOX15O60248 233 aa16.45■□□□□ 0.22
HCFC1R1-209ENST00000576921 LSM3P62310 102 aaKnown RBP16.45■□□□□ 0.22
HCFC1R1-209ENST00000576921 ACTBL2Q562R1 376 aa16.45■□□□□ 0.22
HCFC1R1-209ENST00000576921 TCTEX1D1Q8N7M0 179 aa16.45■□□□□ 0.22
HCFC1R1-209ENST00000576921 CNIH1O95406 144 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 IGLV2-23P01705 113 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 CTXN2P0C2S0 81 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 LUMP51884 338 aaPredicted RBP16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 TAGLNQ01995 201 aaKnown RBP16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 EGFEM1PQ0D2K5 195 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 KIAA0141Q14154 515 aaPredicted RBP16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 FXYD3Q14802 87 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 CNIH2Q6PI25 160 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 ZNF562Q6V9R5 426 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 ZNF645Q8N7E2 425 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 LFNGQ8NES3 379 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 YIPF6Q96EC8 236 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 ADTRPQ96IZ2 230 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 ANXA10Q9UJ72 324 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 OR2W1Q9Y3N9 320 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 NUBP2Q9Y5Y2 271 aa16.44■□□□□ 0.22
HCFC1R1-209ENST00000576921 K7EIL1 84 aa16.43■□□□□ 0.22
HCFC1R1-209ENST00000576921 CRYZL1O95825 349 aa16.43■□□□□ 0.22
HCFC1R1-209ENST00000576921 DUTP33316 252 aaKnown RBP16.43■□□□□ 0.22
HCFC1R1-209ENST00000576921 LGALS7P47929 136 aa16.43■□□□□ 0.22
HCFC1R1-209ENST00000576921 ARPC4P59998 168 aa16.43■□□□□ 0.22
HCFC1R1-209ENST00000576921 FHL3Q13643 280 aa16.43■□□□□ 0.22
HCFC1R1-209ENST00000576921 TMEM177Q53S58 311 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms