RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 HIST1H2BBP33778 126 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 FABP6P51161 128 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 HIST1H2BDP58876 126 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 HIST1H2BCP62807 126 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 GNB2P62879 340 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 HIST2H2BEQ16778 126 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.46□□□□□ -1.22
NCBP3-204ENST00000574911 TRAT1Q6PIZ9 186 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 C1orf87Q8N0U7 546 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 OR10P1Q8NGE3 313 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 OR10G9Q8NGN4 311 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 OR10G7Q8NGN6 311 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 HIST1H2BHQ93079 126 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 HIST1H2BNQ99877 126 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 HIST1H2BMQ99879 126 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 NAT8Q9UHE5 227 aa7.46□□□□□ -1.22
NCBP3-204ENST00000574911 ST8SIA5O15466 376 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 TGOLN2O43493 480 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 ADH4P08319 380 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 GCH1P30793 250 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 LINC00205P59089 165 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 MEF2BQ02080 365 aaPredicted RBP7.45□□□□□ -1.22
NCBP3-204ENST00000574911 TFF3Q07654 80 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 Q3ZCU0 254 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 FAM180AQ6UWF9 173 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 SPNS3Q6ZMD2 512 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 PIP4P1Q86T03 277 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 RFESDQ8TAC1 157 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 SARAFQ96BY9 339 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 MIOXQ9UGB7 285 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 PSG11Q9UQ72 335 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 ZDBF2Q9HCK1 2354 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 WDFY4Q6ZS81 3184 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 TRBV24-1A0A075B6N3 115 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 TRAV17A0A0B4J275 112 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 PHOX2AO14813 284 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 SPINT2O43291 252 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 CGAP01215 116 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 S100PP25815 95 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 PRDX2P32119 198 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 AARDQ4LEZ3 155 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 FFAR4Q5NUL3 377 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 CYP2G1PQ6ZSU1 146 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 C1orf174Q8IYL3 243 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 LRRC29Q8WV35 223 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 SSX3Q99909 188 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 DCTN5Q9BTE1 182 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 GGACTQ9BVM4 153 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 NPCDR1Q9BY65 106 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 ACTR3CQ9C0K3 210 aaPredicted RBP7.45□□□□□ -1.22
NCBP3-204ENST00000574911 SLC25A22Q9H936 323 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 WASF3Q9UPY6 502 aa7.45□□□□□ -1.22
NCBP3-204ENST00000574911 DEFB108AA8MXU0 73 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 TNFSF13O75888 250 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 KBTBD11O94819 623 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 OPN1MWP04001 364 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 OPN1MW2P0DN77 364 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 OPN1MW3P0DN78 364 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 FOSL1P15407 271 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 EGR1P18146 543 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 WT1P19544 449 aaPredicted RBP7.44□□□□□ -1.22
NCBP3-204ENST00000574911 PSMB3P49720 205 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 RPS16P62249 146 aaKnown RBP7.44□□□□□ -1.22
NCBP3-204ENST00000574911 MZT1Q08AG7 82 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 HNF4GQ14541 408 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 ABHD5Q8WTS1 349 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 STARD4Q96DR4 205 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 QTRT1Q9BXR0 403 aaKnown RBP7.44□□□□□ -1.22
NCBP3-204ENST00000574911 MANBALQ9NQG1 85 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 ZNF71Q9NQZ8 489 aaPredicted RBP7.44□□□□□ -1.22
NCBP3-204ENST00000574911 AHCTF1Q8WYP5 2266 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 MARCH11A6NNE9 402 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 C15orf62A8K5M9 175 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 SEC14L6B5MCN3 397 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 TMEM250H0YL14 139 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 HMGB3O15347 200 aaKnown RBP7.44□□□□□ -1.22
NCBP3-204ENST00000574911 PROP1O75360 226 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 OR9G9P0C7N8 305 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 TRGC1P0CF51 173 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 DUTP33316 252 aaKnown RBP7.44□□□□□ -1.22
NCBP3-204ENST00000574911 TMEM241Q24JQ0 296 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 CR1LQ2VPA4 569 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 SPINK9Q5DT21 86 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 NCR3LG1Q68D85 454 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 BHLHA15Q7RTS1 189 aaPredicted RBP7.44□□□□□ -1.22
NCBP3-204ENST00000574911 FAM90A1Q86YD7 464 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 FAM169BQ8N8A8 192 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 FAM216AQ8WUB2 273 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 GATAD1Q8WUU5 269 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 FRZBQ92765 325 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 R3HDM4Q96D70 268 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 SMIM7Q9BQ49 75 aa7.44□□□□□ -1.22
NCBP3-204ENST00000574911 OPN3Q9H1Y3 402 aaPredicted RBP7.44□□□□□ -1.22
NCBP3-204ENST00000574911 FAM90A9PA6NNJ1 464 aa7.43□□□□□ -1.22
NCBP3-204ENST00000574911 AHRRA9YTQ3 701 aa7.43□□□□□ -1.22
NCBP3-204ENST00000574911 SRRM5B3KS81 715 aa7.43□□□□□ -1.22
NCBP3-204ENST00000574911 IGHV2-70P01814 119 aa7.43□□□□□ -1.22
NCBP3-204ENST00000574911 GPR12P47775 334 aa7.43□□□□□ -1.22
NCBP3-204ENST00000574911 RPL23P62829 140 aaKnown RBP7.43□□□□□ -1.22
NCBP3-204ENST00000574911 MSMPQ1L6U9 139 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms