RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PLPPR1Q8TBJ4 325 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 ORAOV1Q8WV07 137 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 WASHC3Q9Y3C0 194 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 H0Y8G0 127 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 DHHO43323 396 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 VENTXO95231 258 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 CDKN1BP46527 198 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 AARDQ4LEZ3 155 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 TPTE2P1Q5T6R2 138 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 FAM19A2Q8N3H0 131 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 ARL2-SNX15V9GYD0 113 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 TRAV39A0A0B4J263 110 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 A0A0U1RQV5 110 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 DPRXA6NFQ7 191 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 H0Y980 276 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 ATP5G3P48201 142 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 ARL16Q0P5N6 197 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 SIGLEC12Q96PQ1 595 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 RASL10BQ96S79 203 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 NRN1Q9NPD7 142 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 DECR2Q9NUI1 292 aa8.15□□□□□ -1.1
CCDC40-212ENST00000574799 MRPS17Q9Y2R5 130 aaKnown RBP8.15□□□□□ -1.1
CCDC40-212ENST00000574799 SDK2Q58EX2 2172 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 TPRP12270 2363 aaKnown RBP8.15□□□□□ -1.11
CCDC40-212ENST00000574799 SH2D1BO14796 132 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 DUX1O43812 170 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 NPBWR2P48146 333 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 FUT6P51993 359 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 HLA-BQ31612 363 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 NMSQ5H8A3 153 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 SLC25A47Q6Q0C1 308 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 TEX43Q6ZNM6 134 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 ANKRD37Q7Z713 158 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 PLXDC1Q8IUK5 500 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 LYG1Q8N1E2 194 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 DERL1Q9BUN8 251 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 CLCF1Q9UBD9 225 aa8.15□□□□□ -1.11
CCDC40-212ENST00000574799 HSBP1L1C9JCN9 74 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 PAX9P55771 341 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 RBM11P57052 281 aaKnown RBP8.14□□□□□ -1.11
CCDC40-212ENST00000574799 OR8B8Q15620 311 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 MRPL54Q6P161 138 aaKnown RBP8.14□□□□□ -1.11
CCDC40-212ENST00000574799 OR8I2Q8N0Y5 310 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 NUDT10Q8NFP7 164 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 AGMATQ9BSE5 352 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 TMEM147Q9BVK8 224 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 OCIAD1Q9NX40 245 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 TAAR3PQ9P1P4 343 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 TRAV38-1A0A0B4J264 116 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 A0A0G2JRQ6 117 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 RAB29O14966 203 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 PDE6DO43924 150 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 CCL1P22362 96 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 PLA2G5P39877 138 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 LINC01551Q86U37 167 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 C1orf174Q8IYL3 243 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 BCL2L2Q92843 193 aaPredicted RBP8.14□□□□□ -1.11
CCDC40-212ENST00000574799 ST6GALNAC6Q969X2 333 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 NUDT11Q96G61 164 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 LOXL4Q96JB6 756 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 ALKBH3Q96Q83 286 aaPredicted RBP8.14□□□□□ -1.11
CCDC40-212ENST00000574799 MRPL13Q9BYD1 178 aaKnown RBP8.14□□□□□ -1.11
CCDC40-212ENST00000574799 CLN8Q9UBY8 286 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 ETV2O00321 342 aaPredicted RBP8.14□□□□□ -1.11
CCDC40-212ENST00000574799 SYNGR4O95473 234 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 TYMSP04818 313 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 ZNF816Q0VGE8 651 aaPredicted RBP8.14□□□□□ -1.11
CCDC40-212ENST00000574799 ACSM6Q6P461 480 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 KMT5CQ86Y97 462 aa8.14□□□□□ -1.11
CCDC40-212ENST00000574799 ZNF808Q8N4W9 903 aaPredicted RBP8.14□□□□□ -1.11
CCDC40-212ENST00000574799 TTC28Q96AY4 2481 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 G3V3Y1 287 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 HYPMO75409 117 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 APOA2P02652 100 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 B4GALT1P15291 398 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 MRPL14Q6P1L8 145 aaKnown RBP8.13□□□□□ -1.11
CCDC40-212ENST00000574799 SLC24A4Q8NFF2 622 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 OR2D3Q8NGH3 330 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 APOBEC3DQ96AK3 386 aaPredicted RBP8.13□□□□□ -1.11
CCDC40-212ENST00000574799 ELOVL5Q9NYP7 299 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 FBXL7Q9UJT9 491 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 TRAPPC2LQ9UL33 140 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 SLC45A2Q9UMX9 530 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 COX11Q9Y6N1 276 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 RPEL1Q2QD12 228 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 NCOR1O75376 2440 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 FOXI3A8MTJ6 420 aaPredicted RBP8.13□□□□□ -1.11
CCDC40-212ENST00000574799 RIPPLY3P57055 190 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 ZNF331Q9NQX6 463 aaPredicted RBP8.13□□□□□ -1.11
CCDC40-212ENST00000574799 MTCH1Q9NZJ7 389 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 SELENOKQ9Y6D0 94 aa8.13□□□□□ -1.11
CCDC40-212ENST00000574799 IGKV1-12A0A0C4DH73 117 aa8.12□□□□□ -1.11
CCDC40-212ENST00000574799 NTN3O00634 580 aaPredicted RBP8.12□□□□□ -1.11
CCDC40-212ENST00000574799 ZNHIT1O43257 154 aa8.12□□□□□ -1.11
CCDC40-212ENST00000574799 IGKV1D-33P01593 117 aa8.12□□□□□ -1.11
CCDC40-212ENST00000574799 IGKV1-33P01594 117 aa8.12□□□□□ -1.11
CCDC40-212ENST00000574799 IGKV1D-12P01611 117 aa8.12□□□□□ -1.11
CCDC40-212ENST00000574799 SRIP30626 198 aa8.12□□□□□ -1.11
CCDC40-212ENST00000574799 GPM6AP51674 278 aa8.12□□□□□ -1.11
CCDC40-212ENST00000574799 SSPNQ14714 243 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms