RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 IGHV3-7P01780 117 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 GAPDHP04406 335 aaKnown RBP5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 SAA2P0DJI9 122 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 CCL3L1P16619 93 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 S100A1P23297 94 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 TMEM33P57088 247 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 ZNF816Q0VGE8 651 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 IZUMO4Q1ZYL8 232 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 TMEM155Q4W5P6 130 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 MIDNQ504T8 468 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 RPL39P5Q59GN2 51 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 ZNF841Q6ZN19 808 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 C1orf229Q6ZS94 237 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 SLC25A48Q6ZT89 311 aaKnown RBP5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 BAP18Q8IXM2 172 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 LYG1Q8N1E2 194 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 LINC00311Q8N616 119 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 OR2C3Q8N628 320 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 C8orf31Q8N9H6 132 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 ZNF596Q8TC21 504 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 DDB2Q92466 427 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 RAB1CQ92928 201 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 R3HDM4Q96D70 268 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 NEIL1Q96FI4 390 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 TIMD4Q96H15 378 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 BBC3Q96PG8 261 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 RAB40CQ96S21 281 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 ZNF251Q9BRH9 671 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 SLC25A31Q9H0C2 315 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 MAGT1Q9H0U3 335 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 SLC25A32Q9H2D1 315 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 FBXL17Q9UF56 701 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 MIOXQ9UGB7 285 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 RALYQ9UKM9 306 aaKnown RBP5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 PRELID3BQ9Y3B1 194 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 AUP1Q9Y679 476 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 KALRNO60229 2985 aa5.04□□□□□ -1.6
TRAPPC1-204ENST00000571947 A0A087X0M5 115 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 A0A1B0GX30 115 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 IGSF23A1L1A6 192 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 FAM24AA6NFZ4 105 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 FAM90A9PA6NNJ1 464 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 PPIHO43447 177 aaKnown RBP5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 SYNGR2O43760 224 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 SSSCA1O60232 199 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 FCGR3BO75015 233 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 MED6O75586 246 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 JTBO76095 146 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 LY6HO94772 140 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 NXPH3O95157 252 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 TMEM50AO95807 157 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 KRASP01116 189 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 RBP4P02753 201 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 NMBP08949 121 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 G6PCP35575 357 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 GNG10P50151 68 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 ARHGDIBP52566 201 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 PAX9P55771 341 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 LINC00205P59089 165 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 RPL23AP62750 156 aaKnown RBP5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 EWSR1Q01844 656 aaKnown RBP eCLIP5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 NHLH2Q02577 135 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 AVPI1Q5T686 147 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 RPL7L1Q6DKI1 246 aaKnown RBP5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 ZNF833PQ6ZTB9 187 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 H2BFWTQ7Z2G1 175 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 ZNF295-AS1Q8N0V1 137 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 C11orf42Q8N5U0 333 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 TMEM252Q8N6L7 170 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 OR8B3Q8NGG8 313 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 OR4S2Q8NH73 311 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 C8orf46Q8TAG6 207 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 LRRC20Q8TCA0 184 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 PCNPQ8WW12 178 aaKnown RBP5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 BSCL2Q96G97 398 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 SMIM8Q96KF7 97 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 OR8B2Q96RD0 313 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 S1PR3Q99500 378 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 ARV1Q9H2C2 271 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 CHODLQ9H9P2 273 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 UBTD1Q9HAC8 227 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 LYRM2Q9NU23 88 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 MED9Q9NWA0 146 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 WSB1Q9Y6I7 421 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 PLXNB1O43157 2135 aa5.03□□□□□ -1.6
TRAPPC1-204ENST00000571947 CFAP46Q8IYW2 2715 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 BORCS7-ASMTA0A0B4J1R7 106 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 A0A1W2PPH5 198 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 LEUTXA8MZ59 168 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 J3QR06 171 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 FGF16O43320 207 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 TXNL1O43396 289 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 F12P00748 615 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 PRB1P04280 392 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 IGHV1-8P0DP01 117 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 RRASP10301 218 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 NQO2P16083 231 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 CDKN1AP38936 164 aa5.02□□□□□ -1.61
TRAPPC1-204ENST00000571947 CAV2P51636 162 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 915 ms