RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 FBXO7Q9Y3I1 522 aa10.2□□□□□ -0.78
CNOT1-220ENST00000569916 RBM7Q9Y580 266 aaKnown RBP10.2□□□□□ -0.78
CNOT1-220ENST00000569916 DNAH3Q8TD57 4116 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 FCN1O00602 326 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 SPDEFO95238 335 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 CTXN2P0C2S0 81 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 OR5H8P0DN80 308 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 IGLL1P15814 213 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 CRIP2P52943 208 aaPredicted RBP10.19□□□□□ -0.78
CNOT1-220ENST00000569916 PLGLAQ15195 96 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 PSG5Q15238 335 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 C19orf54Q5BKX5 351 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 CNIH2Q6PI25 160 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 ZNF695Q8IW36 515 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 OR13F1Q8NGS4 319 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 MYOZ3Q8TDC0 251 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 P2RX4Q99571 388 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 TSNAXQ99598 290 aaKnown RBP10.19□□□□□ -0.78
CNOT1-220ENST00000569916 TPSG1Q9NRR2 321 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 METTL1Q9UBP6 276 aaKnown RBP10.19□□□□□ -0.78
CNOT1-220ENST00000569916 ANXA10Q9UJ72 324 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 WSB1Q9Y6I7 421 aa10.19□□□□□ -0.78
CNOT1-220ENST00000569916 TRAV41A0A0B4J266 112 aa10.18□□□□□ -0.78
CNOT1-220ENST00000569916 IGLV1-40P01703 118 aa10.18□□□□□ -0.78
CNOT1-220ENST00000569916 NFYAP23511 347 aaPredicted RBP10.18□□□□□ -0.78
CNOT1-220ENST00000569916 CDX1P47902 265 aaPredicted RBP10.18□□□□□ -0.78
CNOT1-220ENST00000569916 NCS1P62166 190 aa10.18□□□□□ -0.78
CNOT1-220ENST00000569916 RPS16P62249 146 aaKnown RBP10.18□□□□□ -0.78
CNOT1-220ENST00000569916 CX3CL1P78423 397 aa10.18□□□□□ -0.78
CNOT1-220ENST00000569916 ZNF660Q6AZW8 331 aaPredicted RBP10.18□□□□□ -0.78
CNOT1-220ENST00000569916 MRPL41Q8IXM3 137 aaKnown RBP10.18□□□□□ -0.78
CNOT1-220ENST00000569916 GVQW1Q8N7I0 195 aa10.18□□□□□ -0.78
CNOT1-220ENST00000569916 DDB2Q92466 427 aa10.18□□□□□ -0.78
CNOT1-220ENST00000569916 SLC25A46Q96AG3 418 aa10.18□□□□□ -0.78
CNOT1-220ENST00000569916 FLYWCH2Q96CP2 140 aaKnown RBP10.18□□□□□ -0.78
CNOT1-220ENST00000569916 RCC1LQ96I51 464 aaKnown RBP10.18□□□□□ -0.78
CNOT1-220ENST00000569916 AUNIPQ9H7T9 357 aa10.18□□□□□ -0.78
CNOT1-220ENST00000569916 DIABLOQ9NR28 239 aa10.18□□□□□ -0.78
CNOT1-220ENST00000569916 OR2W1Q9Y3N9 320 aa10.18□□□□□ -0.78
CNOT1-220ENST00000569916 IGKV1D-13A0A0B4J2D9 117 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 LINC00473A8K010 186 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 J3QRK9 145 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 SLC25A17O43808 307 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 CA2P00918 260 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 IGLV2-23P01705 113 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 HLA-DQB1P01920 261 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 IGKV1-13P0DP09 117 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 EGR2P11161 476 aaPredicted RBP10.17□□□□□ -0.78
CNOT1-220ENST00000569916 PTHLHP12272 177 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 DUTP33316 252 aaKnown RBP10.17□□□□□ -0.78
CNOT1-220ENST00000569916 MYCNOSP40205 109 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 LUMP51884 338 aaPredicted RBP10.17□□□□□ -0.78
CNOT1-220ENST00000569916 VBP1P61758 197 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 ECSCRQ19T08 205 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 UBE2NLQ5JXB2 153 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 HOGA1Q86XE5 327 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 ZNF645Q8N7E2 425 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 MINDY2Q8NBR6 621 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 BVESQ8NE79 360 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 BEST4Q8NFU0 473 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 RAX2Q96IS3 184 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 DUX3Q96PT4 197 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 CLCC1Q96S66 551 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 KLK15Q9H2R5 256 aa10.17□□□□□ -0.78
CNOT1-220ENST00000569916 XRCC3O43542 346 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 SOX15O60248 233 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 TUSC2O75896 110 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 IGLV2-14P01704 120 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
CNOT1-220ENST00000569916 SSBP2P81877 361 aaPredicted RBP10.16□□□□□ -0.78
CNOT1-220ENST00000569916 TAGLNQ01995 201 aaKnown RBP10.16□□□□□ -0.78
CNOT1-220ENST00000569916 KIAA0141Q14154 515 aaPredicted RBP10.16□□□□□ -0.78
CNOT1-220ENST00000569916 RTL8BQ17RB0 113 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 DEFB136Q30KP8 78 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 TMEM177Q53S58 311 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 FOXB2Q5VYV0 432 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 ZNF562Q6V9R5 426 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 SAMD12Q8N8I0 201 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 C4orf3Q8WVX3 66 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
CNOT1-220ENST00000569916 ADTRPQ96IZ2 230 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 HARBI1Q96MB7 349 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 FAM103A1Q9BTL3 118 aaKnown RBP10.16□□□□□ -0.78
CNOT1-220ENST00000569916 NUBP2Q9Y5Y2 271 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 A3GALT2U3KPV4 340 aa10.16□□□□□ -0.78
CNOT1-220ENST00000569916 NOTCH3Q9UM47 2321 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 A0A1W2PN81 502 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 SRRM4A7MD48 611 aaKnown RBP10.15□□□□□ -0.78
CNOT1-220ENST00000569916 CCL24O00175 119 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 ARPC1BO15143 372 aaKnown RBP10.15□□□□□ -0.78
CNOT1-220ENST00000569916 GABARAPO95166 117 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 DUS4LO95620 317 aaKnown RBP10.15□□□□□ -0.78
CNOT1-220ENST00000569916 CRYGBP07316 175 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 RRASP10301 218 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 CHRNA7P36544 502 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 LGALS7P47929 136 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 ARPC4P59998 168 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 CBX3Q13185 183 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 PPP1R27Q86WC6 154 aa10.15□□□□□ -0.78
CNOT1-220ENST00000569916 TCTEX1D1Q8N7M0 179 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms