RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	SERPINA12	Q8IW75	414 aa		4.38	□□□□□ -1.71
BBS4-218	ENST00000569440	IQCF1	Q8N6M8	205 aa		4.38	□□□□□ -1.71
BBS4-218	ENST00000569440	OR52L2P	Q8NGH6	319 aa		4.38	□□□□□ -1.71
BBS4-218	ENST00000569440	FAM162A	Q96A26	154 aa		4.38	□□□□□ -1.71
BBS4-218	ENST00000569440	TSNAX	Q99598	290 aa	Known RBP	4.38	□□□□□ -1.71
BBS4-218	ENST00000569440	IFI27L2	Q9H2X8	130 aa		4.38	□□□□□ -1.71
BBS4-218	ENST00000569440	NEK6	Q9HC98	313 aa		4.38	□□□□□ -1.71
BBS4-218	ENST00000569440	GID8	Q9NWU2	228 aa		4.38	□□□□□ -1.71
BBS4-218	ENST00000569440	ING4	Q9UNL4	249 aa		4.38	□□□□□ -1.71
BBS4-218	ENST00000569440	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.38	□□□□□ -1.71
BBS4-218	ENST00000569440	LOC107986453	A0A1B0GWG9	222 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	CCDC182	A6NF36	153 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440		H7C2Y5	167 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	AIP	O00170	330 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	YPEL1	O60688	119 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	TMEM127	O75204	238 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	KRT36	O76013	467 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	IGLV2-23	P01705	113 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	MRPL3	P09001	348 aa	Known RBP	4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	APELA	P0DMC3	54 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	FUT3	P21217	361 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	FUS	P35637	526 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	ARL3	P36405	182 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	PPP1CC	P36873	323 aa	Known RBP	4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	CMC4	P56277	68 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	CXCR4	P61073	352 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	RPS7	P62081	194 aa	Known RBP	4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	RPS27A	P62979	156 aa	Known RBP	4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	RPL39P5	Q59GN2	51 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	SLC25A30	Q5SVS4	291 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	C6orf141	Q5SZD1	244 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	GAPT	Q8N292	157 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	PXT1	Q8NFP0	134 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	FGGY	Q96C11	551 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	PYURF	Q96I23	114 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	YPEL2	Q96QA6	119 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	SLC2A9	Q9NRM0	540 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	ENOPH1	Q9UHY7	261 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	JPT1	Q9UK76	154 aa		4.37	□□□□□ -1.71
BBS4-218	ENST00000569440	SAMD4A	Q9UPU9	718 aa	Known RBP	4.37	□□□□□ -1.71
BBS4-218	ENST00000569440		A0A1B0GW64	132 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440		B5MCH6	92 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	NME4	O00746	187 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	RAB29	O14966	203 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	MRPS14	O60783	128 aa	Known RBP	4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	PROP1	O75360	226 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	OR2J3	O76001	311 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	RPP14	O95059	124 aa	Known RBP	4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	MYOD1	P15172	320 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	RCC1	P18754	421 aa	Predicted RBP	4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	PSMB6	P28072	239 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	ASIP	P42127	132 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	HTD2	P86397	168 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	KISS1	Q15726	138 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	ZSCAN26	Q16670	478 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	TMEM41B	Q5BJD5	291 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	NHLRC3	Q5JS37	347 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	C6orf183	Q5T699	404 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	DMKN	Q6E0U4	476 aa	Predicted RBP	4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	ZNF529	Q6P280	563 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	CLEC19A	Q6UXS0	136 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	ZNF66	Q6ZN08	573 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	ARPIN	Q7Z6K5	226 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	PRSS35	Q8N3Z0	413 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	TTC9C	Q8N5M4	171 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	C15orf53	Q8NAA6	179 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	AQP11	Q8NBQ7	271 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	ZBTB34	Q8NCN2	500 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	CSNK1G2-AS1	Q8NCQ2	148 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	OR10AC1	Q8NH08	325 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	KRTAP1-5	Q9BYS1	174 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	TAF9B	Q9HBM6	251 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	PIPOX	Q9P0Z9	390 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	TRAPPC2L	Q9UL33	140 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	UFC1	Q9Y3C8	167 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	TMED3	Q9Y3Q3	217 aa		4.36	□□□□□ -1.71
BBS4-218	ENST00000569440	TNFRSF11B	O00300	401 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	GEMIN2	O14893	280 aa	Known RBP	4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	ARPC2	O15144	300 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	OR7C1	O76099	320 aa	Predicted RBP	4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	CCNB2	O95067	398 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	IGHV3-23	P01764	117 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	CTSD	P07339	412 aa	Predicted RBP	4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	OCM2	P0CE71	109 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	OCM	P0CE72	109 aa	Predicted RBP	4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	UBC	P0CG48	685 aa	Known RBP	4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	HAMP	P81172	84 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	GK3P	Q14409	553 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	KLK9	Q2XQG4	91 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	GLT8D1	Q68CQ7	371 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	GLYAT	Q6IB77	296 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	TRAT1	Q6PIZ9	186 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	ZNF383	Q8NA42	475 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	OR2AK2	Q8NG84	335 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	OR13C9	Q8NGT0	318 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	OR4K15	Q8NH41	348 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	TEX47	Q8TBZ9	253 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	C16orf45	Q96MC5	204 aa	Predicted RBP	4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	PHB2	Q99623	299 aa		4.35	□□□□□ -1.71
BBS4-218	ENST00000569440	ZNF221	Q9UK13	617 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms