RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PQLC1Q8N2U9 271 aa11.95□□□□□ -0.5
HERPUD1-215ENST00000568676 DRAXINQ8NBI3 349 aaPredicted RBP11.95□□□□□ -0.5
HERPUD1-215ENST00000568676 BVESQ8NE79 360 aa11.95□□□□□ -0.5
HERPUD1-215ENST00000568676 CYYR1Q96J86 154 aa11.95□□□□□ -0.5
HERPUD1-215ENST00000568676 URM1Q9BTM9 101 aaKnown RBP11.95□□□□□ -0.5
HERPUD1-215ENST00000568676 PARP12Q9H0J9 701 aaKnown RBP11.95□□□□□ -0.5
HERPUD1-215ENST00000568676 SLC35D1Q9NTN3 355 aa11.95□□□□□ -0.5
HERPUD1-215ENST00000568676 PNMA8CA0A1B0GUJ8 204 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 MYL12BO14950 172 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 SERPINB10P48595 397 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 WNT4P56705 351 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 SSBP2P81877 361 aaPredicted RBP11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 MS4A15Q8N5U1 240 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 NEURL2Q9BR09 285 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 S100A14Q9HCY8 104 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 C12orf4Q9NQ89 552 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 OR1A1Q9P1Q5 309 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 HSF4Q9ULV5 492 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 TNCP24821 2201 aa11.94□□□□□ -0.5
HERPUD1-215ENST00000568676 FAM223BA6NKX1 122 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 TMEM14DPA8MWL7 114 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 IGLV2-23P01705 113 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 CRYGBP07316 175 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 SRMP19623 302 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 UNC119Q13432 240 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 DYRK1AQ13627 763 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 RNLSQ5VYX0 342 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 OR10K2Q6IF99 312 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 FAM223AQ8IWN6 122 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 GGHQ92820 318 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 HARBI1Q96MB7 349 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 NICN1Q9BSH3 213 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 PLEKHA3Q9HB20 300 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 Q9N2K0 584 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 COA4Q9NYJ1 87 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 HYDINQ4G0P3 5121 aa11.93□□□□□ -0.5
HERPUD1-215ENST00000568676 IZUMO1RA6ND01 250 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 ERICH4A6NGS2 130 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 M0R1X1 148 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 RRASP10301 218 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 CD37P11049 281 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 RANBP1P43487 201 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 QRFPP83859 136 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 ACSM3Q53FZ2 586 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 OR6M1Q8NGM8 313 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 PHB2Q99623 299 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 RETNQ9HD89 108 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 C8orf4Q9NR00 106 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 AK3Q9UIJ7 227 aa11.92□□□□□ -0.5
HERPUD1-215ENST00000568676 TUSC2O75896 110 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 DIRAS3O95661 229 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 TRBV12-3P01733 135 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 SCTP09683 121 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 OR9G9P0C7N8 305 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 PJVKQ0ZLH3 352 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 RTL8BQ17RB0 113 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 CD300EQ496F6 205 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 TMEM177Q53S58 311 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 RBM48Q5RL73 367 aaKnown RBP11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 LRRTM1Q86UE6 522 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 FAM89BQ8N5H3 189 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 ADAD2Q8NCV1 583 aaKnown RBP11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 KCTD12Q96CX2 325 aaKnown RBP11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 FAM110AQ9BQ89 295 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 RDH8Q9NYR8 311 aa11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 TECRQ9NZ01 308 aaKnown RBP11.91□□□□□ -0.5
HERPUD1-215ENST00000568676 TRDCB7Z8K6 153 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 SHOXO15266 292 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 CREBL2O60519 120 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 SNRPBP14678 240 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 TPBGQ13641 420 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 VMA21Q3ZAQ7 101 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 NANOGP1Q8N7R0 232 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 TEX45Q8NA69 505 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 OR4A4PQ8NGN8 299 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 DYNLRB2Q8TF09 96 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 LPAR5Q9H1C0 372 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 ZC4H2Q9NQZ6 224 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 ADAM30Q9UKF2 790 aa11.9□□□□□ -0.5
HERPUD1-215ENST00000568676 A0A0A6YYD4 124 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 RBMY1BA6NDE4 496 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 RBMY1EA6NEQ0 496 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 MSGN1A6NI15 193 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 ZNF785A8K8V0 405 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 OR11H12B2RN74 326 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 SOCS1O15524 211 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 RBMY1DP0C7P1 496 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 MAP2K4P45985 399 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 LINC00205P59089 165 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 ATP5G2Q06055 141 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 HSD17B12Q53GQ0 312 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 SLC16A13Q7RTY0 426 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 CYGBQ8WWM9 190 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 LINC00476Q8WZB0 136 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 ADTRPQ96IZ2 230 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 CMSS1Q9BQ75 279 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 HDHD3Q9BSH5 251 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 CENPOQ9BU64 300 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
HERPUD1-215ENST00000568676 PLCXD1Q9NUJ7 323 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms