RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 RBM11P57052 281 aaKnown RBP4.61□□□□□ -1.67
LINC01541-202ENST00000568095 MRPS34P82930 218 aaKnown RBP4.61□□□□□ -1.67
LINC01541-202ENST00000568095 TMEM267Q0VDI3 215 aaPredicted RBP4.61□□□□□ -1.67
LINC01541-202ENST00000568095 PIGYQ3MUY2 71 aa4.61□□□□□ -1.67
LINC01541-202ENST00000568095 GJC3Q8NFK1 279 aa4.61□□□□□ -1.67
LINC01541-202ENST00000568095 TAF15Q92804 592 aaKnown RBP eCLIP4.61□□□□□ -1.67
LINC01541-202ENST00000568095 OXGR1Q96P68 337 aa4.61□□□□□ -1.67
LINC01541-202ENST00000568095 VAMP8Q9BV40 100 aa4.61□□□□□ -1.67
LINC01541-202ENST00000568095 ZNF703Q9H7S9 590 aaPredicted RBP4.61□□□□□ -1.67
LINC01541-202ENST00000568095 ZNF160Q9HCG1 818 aa4.61□□□□□ -1.67
LINC01541-202ENST00000568095 FOXJ2Q9P0K8 574 aa4.61□□□□□ -1.67
LINC01541-202ENST00000568095 WIPI2Q9Y4P8 454 aa4.61□□□□□ -1.67
LINC01541-202ENST00000568095 CHD3Q12873 2000 aaKnown RBP4.61□□□□□ -1.67
LINC01541-202ENST00000568095 AKAP13Q12802 2813 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 C20orf202A1L168 122 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 SLC33A1O00400 549 aaPredicted RBP4.6□□□□□ -1.67
LINC01541-202ENST00000568095 SPRY1O43609 319 aaPredicted RBP4.6□□□□□ -1.67
LINC01541-202ENST00000568095 ANGPTL7O43827 346 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 PGLYRP1O75594 196 aaPredicted RBP4.6□□□□□ -1.67
LINC01541-202ENST00000568095 OR2J2O76002 312 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 WISP2O76076 250 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 PPP1CBP62140 327 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 OR8G2PQ6IF36 304 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 Q6ZRM9 215 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.6□□□□□ -1.67
LINC01541-202ENST00000568095 CALHM1Q8IU99 346 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 C1orf174Q8IYL3 243 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 LHX4Q969G2 390 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 RPUSD4Q96CM3 377 aaKnown RBP4.6□□□□□ -1.67
LINC01541-202ENST00000568095 NEIL1Q96FI4 390 aaPredicted RBP4.6□□□□□ -1.67
LINC01541-202ENST00000568095 POLR1DQ9Y2S0 133 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 LOXL2Q9Y4K0 774 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 IGKV1-6A0A0C4DH72 117 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 NPIPA2E9PIF3 369 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 SYNGR2O43760 224 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 CBR3O75828 277 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 NXPH2O95156 264 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 IGKV1-39P01597 117 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 IGKV1D-39P04432 117 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 IGLC2P0DOY2 106 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 IGLC3P0DOY3 106 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 MSR1P21757 451 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 F2RP25116 425 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 ARL3P36405 182 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 MALLQ13021 153 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 NSDHLQ15738 373 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 VWC2Q2TAL6 325 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 PLPPR5Q32ZL2 321 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 SNAI3Q3KNW1 292 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 FAM78BQ5VT40 261 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 HLA-DQA1Q5Y7H0 255 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 ACSM6Q6P461 480 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 TMEM14EPQ6UXP3 125 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 LYG1Q8N1E2 194 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 OR10G8Q8NGN5 311 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 OR2Y1Q8NGV0 311 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 EXTL1Q92935 676 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 TECTBQ96PL2 329 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 OR4C12Q96R67 309 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 RNF2Q99496 336 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 SLC39A9Q9NUM3 307 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 MRPS16Q9Y3D3 137 aaKnown RBP4.6□□□□□ -1.67
LINC01541-202ENST00000568095 RNF114Q9Y508 228 aa4.6□□□□□ -1.67
LINC01541-202ENST00000568095 TRBV6-6A0A0A6YYG2 114 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 IGHV2-70DA0A0C4DH43 119 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 A0A0U1RQK1 487 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 ZNF320A2RRD8 509 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 AQP7P3A6NL99 342 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 CD33P20138 364 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 NTF4P34130 210 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 HBG1P69891 147 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 HBG2P69892 147 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 Q0VFX4 171 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 MMDQ15546 238 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 MSMO1Q15800 293 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 FAM69BQ5VUD6 431 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 PCSK4Q6UW60 755 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 GATAD1Q8WUU5 269 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 GMPPAQ96IJ6 420 aaPredicted RBP4.59□□□□□ -1.67
LINC01541-202ENST00000568095 CIB3Q96Q77 187 aaPredicted RBP4.59□□□□□ -1.67
LINC01541-202ENST00000568095 UQCR10Q9UDW1 63 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 FBXL7Q9UJT9 491 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 ST3GAL6Q9Y274 331 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 PAM16Q9Y3D7 125 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 COX11Q9Y6N1 276 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 KIAA2026Q5HYC2 2103 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 PMS2P5A8MQ11 134 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 FAM90A26D6RGX4 464 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 M0R135 149 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 PDE6DO43924 150 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 HYPMO75409 117 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 SERF1AO75920 110 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 IGLV2-14P01704 120 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 GPX1P07203 203 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 CTXN2P0C2S0 81 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 CEACAM8P31997 349 aaPredicted RBP4.59□□□□□ -1.67
LINC01541-202ENST00000568095 CLDN17P56750 224 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 ATP6V1FQ16864 119 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 PHYHD1Q5SRE7 291 aa4.59□□□□□ -1.67
LINC01541-202ENST00000568095 PPP1R32Q7Z5V6 425 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms