RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	TMEM234	Q8WY98	164 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	RAB8B	Q92930	207 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	MRGPRF	Q96AM1	343 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	SPSB1	Q96BD6	273 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	ZMYND19	Q96E35	227 aa	Predicted RBP	4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	OR10C1	Q96KK4	312 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	SMIM14	Q96QK8	99 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	TBX5	Q99593	518 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	TXNDC17	Q9BRA2	123 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	FGF21	Q9NSA1	209 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	C5AR2	Q9P296	337 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	RARRES3	Q9UL19	164 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	CRYBG3	Q68DQ2	2970 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	ESPL1	Q14674	2120 aa		4.06	□□□□□ -1.76
CBFB-208	ENST00000567947	UNC79	Q9P2D8	2635 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	IGHV4OR15-8	A0A075B7B6	117 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	IGHV2-26	A0A0B4J1V2	119 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	IGHV5-51	A0A0C4DH38	117 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947		A0A0J9YY10	115 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	OR2AG2	A6NM03	316 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	CPSF4L	A6NMK7	179 aa	Known RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ZNF727	A8MUV8	499 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947		B9A039	149 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947		H7BYZ3	331 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ST8SIA3	O43173	380 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	FGF17	O60258	216 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	NME2P1	O60361	137 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	B4GALT2	O60909	372 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ALOX12B	O75342	701 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	LYPD3	O95274	346 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	CDS2	O95674	445 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	HLA-H	P01893	362 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	KLK1	P06870	262 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	CTSD	P07339	412 aa	Predicted RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ZNF705D	P0CH99	300 aa	Predicted RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ZNF705B	P0CI00	300 aa	Predicted RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	BCL2	P10415	239 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	CCL4	P13236	92 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	AKR1C4	P17516	323 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	FUT3	P21217	361 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	PSMB5	P28074	263 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	GABRA3	P34903	492 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	NPBWR2	P48146	333 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	PPOX	P50336	477 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	HNRNPA3	P51991	378 aa	Known RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ZNF136	P52737	540 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	BRWD1-AS2	P59051	145 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	RPL23A	P62750	156 aa	Known RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	CSNK1G2	P78368	415 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	SERF2	P84101	59 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	HTD2	P86397	168 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	FUT5	Q11128	374 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	FAM53B	Q14153	422 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	GNMT	Q14749	295 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ACKR1	Q16570	336 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	IAH1	Q2TAA2	248 aa	Predicted RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ZNF343	Q6P1L6	599 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	C19orf35	Q6ZS72	473 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	C1orf122	Q6ZSJ8	110 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	VASH2	Q86V25	355 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	NIT1	Q86X76	327 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	CDC20B	Q86Y33	519 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ZNF843	Q8N446	348 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	RAB42	Q8N4Z0	105 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ZNF676	Q8N7Q3	588 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	CYB561D1	Q8N8Q1	229 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	OR5A2	Q8NGI9	324 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	TMEM255B	Q8WV15	326 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	TMEM230	Q96A57	120 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	PINX1	Q96BK5	328 aa	Known RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	REEP6	Q96HR9	211 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	PGAM5	Q96HS1	289 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	C4orf45	Q96LM5	186 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	SPIN2A	Q99865	258 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	SPIN2B	Q9BPZ2	258 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	WFDC6	Q9BQY6	131 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	PSMG3	Q9BT73	122 aa	Predicted RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	SLC25A18	Q9H1K4	315 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	C5orf66	Q9H5L9	145 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	WDR76	Q9H967	626 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	HRASLS2	Q9NWW9	162 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	SLC7A7	Q9UM01	511 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	C14orf166	Q9Y224	244 aa	Known RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	B3GALT5	Q9Y2C3	310 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	RBM7	Q9Y580	266 aa	Known RBP	4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	NAV2	Q8IVL1	2488 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	CENPE	Q02224	2701 aa		4.05	□□□□□ -1.76
CBFB-208	ENST00000567947	ITPR2	Q14571	2701 aa		4.04	□□□□□ -1.76
CBFB-208	ENST00000567947	CELSR2	Q9HCU4	2923 aa		4.04	□□□□□ -1.76
CBFB-208	ENST00000567947	TRAV8-7	A0A075B6U6	113 aa		4.04	□□□□□ -1.76
CBFB-208	ENST00000567947	NSG1	A0A0A6YYJ2	146 aa		4.04	□□□□□ -1.76
CBFB-208	ENST00000567947		A0A1W2PPK0	400 aa		4.04	□□□□□ -1.76
CBFB-208	ENST00000567947	NKX2-6	A6NCS4	301 aa		4.04	□□□□□ -1.76
CBFB-208	ENST00000567947	LIPT2	A6NK58	231 aa		4.04	□□□□□ -1.76
CBFB-208	ENST00000567947	VSTM2B	A6NLU5	285 aa		4.04	□□□□□ -1.76
CBFB-208	ENST00000567947	C17orf112	F2Z3M2	114 aa		4.04	□□□□□ -1.76
CBFB-208	ENST00000567947		H0YIG0	161 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms